RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 EFR3AQ14156 821 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 EXOSC7Q15024 291 aaKnown RBP12.51□□□□□ -0.41
RDH13-209ENST00000587721 DCST1Q5T197 706 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 BIVMQ86UB2 503 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 PLCZ1Q86YW0 608 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 TRIM42Q8IWZ5 723 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 PLD6Q8N2A8 252 aaKnown RBP12.51□□□□□ -0.41
RDH13-209ENST00000587721 GBP7Q8N8V2 638 aaPredicted RBP12.51□□□□□ -0.41
RDH13-209ENST00000587721 C9orf106Q8NAJ2 232 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 TM4SF18Q96CE8 201 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 CTHRC1Q96CG8 243 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 ERP27Q96DN0 273 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 COL21A1Q96P44 957 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 UCN2Q96RP3 112 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 NODALQ96S42 347 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 MRPL57Q9BQC6 102 aaKnown RBP12.51□□□□□ -0.41
RDH13-209ENST00000587721 TUBA1CQ9BQE3 449 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 OR2B2Q9GZK3 357 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 MRPL46Q9H2W6 279 aaKnown RBP12.51□□□□□ -0.41
RDH13-209ENST00000587721 ZBTB26Q9HCK0 441 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 GALNT9Q9HCQ5 603 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 GIMAP4Q9NUV9 329 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 TAS2R10Q9NYW0 307 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 ZNF639Q9UID6 485 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 UTS2RQ9UKP6 389 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 EIF3LQ9Y262 564 aaKnown RBP12.51□□□□□ -0.41
RDH13-209ENST00000587721 DTX4Q9Y2E6 619 aa12.51□□□□□ -0.41
RDH13-209ENST00000587721 ABCA4P78363 2273 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 ESYT3A0FGR9 886 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 C2orf72A6NCS6 295 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 TO15178 435 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 PDYNP01213 254 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 KRT6AP02538 564 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 KRT6BP04259 564 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 HOXB4P17483 251 aaPredicted RBP12.5□□□□□ -0.41
RDH13-209ENST00000587721 SRD5A2P31213 254 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 KRT6CP48668 564 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 ETF1P62495 437 aaKnown RBP12.5□□□□□ -0.41
RDH13-209ENST00000587721 HMGCS1Q01581 520 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 MGAT2Q10469 447 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 ERCC6LQ2NKX8 1250 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 TRMT12Q53H54 448 aaKnown RBP12.5□□□□□ -0.41
RDH13-209ENST00000587721 LUZP2Q86TE4 346 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 RELL1Q8IUW5 271 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 WDSUB1Q8N9V3 476 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 RDH11Q8TC12 318 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 SLC44A1Q8WWI5 657 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 SMPDL3BQ92485 455 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 TMBIM1Q969X1 311 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 INTS12Q96CB8 462 aaKnown RBP12.5□□□□□ -0.41
RDH13-209ENST00000587721 SFXN2Q96NB2 322 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 NSUN5Q96P11 429 aaKnown RBP12.5□□□□□ -0.41
RDH13-209ENST00000587721 PLEKHF2Q9H8W4 249 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 BEX4Q9NWD9 120 aaPredicted RBP12.5□□□□□ -0.41
RDH13-209ENST00000587721 GALNT8Q9NY28 637 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 EHD3Q9NZN3 535 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 VPS29Q9UBQ0 182 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 TRPS1Q9UHF7 1281 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 DKKL1Q9UK85 242 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 PACSIN3Q9UKS6 424 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 ITPR3Q14573 2671 aa12.5□□□□□ -0.41
RDH13-209ENST00000587721 NCKAP5O14513 1909 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 SH3D21A4FU49 640 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 ARHGEF9O43307 516 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 CBX7O95931 251 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 HRGP04196 525 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 RPS17P08708 135 aaKnown RBP12.49□□□□□ -0.41
RDH13-209ENST00000587721 HSD3B1P14060 373 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 TAC1P20366 129 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 HSD3B2P26439 372 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 IL12BP29460 328 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 PTGDSP41222 190 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 MAGEA12P43365 314 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 SLCO1A2P46721 670 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 EMDP50402 254 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 CDH13P55290 713 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 SLC7A5Q01650 507 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 GALNT1Q10472 559 aaPredicted RBP12.49□□□□□ -0.41
RDH13-209ENST00000587721 FOXF2Q12947 444 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 HEPACAMQ14CZ8 416 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 LGSNQ5TDP6 509 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 SHEQ5VZ18 495 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 OR2A2Q6IF42 318 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 P4HA3Q7Z4N8 544 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 C1orf52Q8N6N3 182 aaKnown RBP12.49□□□□□ -0.41
RDH13-209ENST00000587721 ZNF675Q8TD23 568 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 CNRIP1Q96F85 164 aaPredicted RBP12.49□□□□□ -0.41
RDH13-209ENST00000587721 SLC35A4Q96G79 324 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 C18orf12Q96KH6 178 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 DLL4Q9NR61 685 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
RDH13-209ENST00000587721 ZDHHC18Q9NUE0 388 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 NINJ2Q9NZG7 142 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 SENP1Q9P0U3 644 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 DLGAP4Q9Y2H0 992 aa12.49□□□□□ -0.41
RDH13-209ENST00000587721 RPH3AQ9Y2J0 694 aaPredicted RBP12.49□□□□□ -0.41
RDH13-209ENST00000587721 GPR55Q9Y2T6 319 aaPredicted RBP12.49□□□□□ -0.41
RDH13-209ENST00000587721 MRPS18CQ9Y3D5 142 aaKnown RBP12.49□□□□□ -0.41
RDH13-209ENST00000587721 WIF1Q9Y5W5 379 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms