RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 MAN2A2P49641 1150 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 FADDQ13158 208 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 ZNHIT3Q15649 155 aaPredicted RBP15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 DEFB109BQ30KR1 87 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 NANOGP8Q6NSW7 305 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 CDC73Q6P1J9 531 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 RNF130Q86XS8 419 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 LGI4Q8N135 537 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 TP53INP1Q96A56 240 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 SH3GL1Q99961 368 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 LHPPQ9H008 270 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 SERHL2Q9H4I8 314 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 NANOGQ9H9S0 305 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 CPNE5Q9HCH3 593 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 GPR55Q9Y2T6 319 aaPredicted RBP15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 KCNMB2Q9Y691 235 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 DOCK10Q96BY6 2186 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 HNRNPCL1O60812 293 aaKnown RBP15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 NKX2-2O95096 273 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 CT45A8P0DMV1 189 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 CT45A9P0DMV2 189 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 GPX2P18283 190 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 DRD5P21918 477 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 MATN1P21941 496 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 SLC6A2P23975 617 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 KHKP50053 298 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 PSPHP78330 225 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 PSG6Q00889 435 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 CT45A2Q5DJT8 189 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 HLA-DQA1Q5Y7H0 255 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 ANGPTL8Q6UXH0 198 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 SLC5A8Q8N695 610 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 PSMF1Q92530 271 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 C16orf58Q96GQ5 468 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 THOC3Q96J01 351 aaKnown RBP15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 GAL3ST4Q96RP7 486 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 STACQ99469 402 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 IKZF5Q9H5V7 419 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 DUSP22Q9NRW4 184 aa15.72■□□□□ 0.11
PRKCSH-203ENST00000586486 CPAMD8Q8IZJ3 1885 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 FRG2CA6NGY1 282 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 EVPLLA8MZ36 301 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 ACOX3O15254 700 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 NME6O75414 186 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 ACP2P11117 423 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 CPOXP36551 454 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 ANXA11P50995 505 aaKnown RBP15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 RPS26P62854 115 aaKnown RBP15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 RGNQ15493 299 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 NPSR1Q6W5P4 371 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 PGAM4Q8N0Y7 254 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 GALNT16Q8N428 558 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 SLC16A11Q8NCK7 471 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 FBXO27Q8NI29 283 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 PNPT1Q8TCS8 783 aaKnown RBP15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 BRIX1Q8TDN6 353 aaKnown RBP15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 LCORQ96JN0 433 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 C1orf21Q9H246 121 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 PIGUQ9H490 435 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 MYOTQ9UBF9 498 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 MED13Q9UHV7 2174 aa15.71■□□□□ 0.11
PRKCSH-203ENST00000586486 PTPRQQ9UMZ3 2332 aa15.71■□□□□ 0.1
PRKCSH-203ENST00000586486 DUXAA6NLW8 204 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 B2RBV5 119 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 TO15178 435 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 ATP5HO75947 161 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 AGR2O95994 175 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 ALOX5P09917 674 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 BMP2P12643 396 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 ITGA3P26006 1051 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 CORO7P57737 925 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 MTPNP58546 118 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 DUSP5Q16690 384 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 COX20Q5RI15 118 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 IRAK1BP1Q5VVH5 260 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 TCTN3Q6NUS6 607 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 C16orf89Q6UX73 402 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 RBM15BQ8NDT2 890 aaKnown RBP15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 SLC9A6Q92581 669 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 JADE3Q92613 823 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 OR7D2Q96RA2 312 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 YIPF4Q9BSR8 244 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 NXF5Q9H1B4 397 aaKnown RBP15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 OR51I1Q9H343 314 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 KAT8Q9H7Z6 458 aaKnown RBP15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 THUMPD1Q9NXG2 353 aaKnown RBP15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 ABCD2Q9UBJ2 740 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 AP3M1Q9Y2T2 418 aa15.7■□□□□ 0.1
PRKCSH-203ENST00000586486 LAMA5O15230 3695 aa15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 HMGN4O00479 90 aa15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 CEACAM4O75871 244 aa15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 SOX11P35716 441 aa15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 PSME3P61289 254 aa15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 MXRA7P84157 204 aa15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 SELPLGQ14242 412 aa15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 RABL3Q5HYI8 236 aa15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 WDR53Q7Z5U6 358 aaPredicted RBP15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 RPS19BP1Q86WX3 136 aaKnown RBP15.69■□□□□ 0.1
PRKCSH-203ENST00000586486 HORMAD2Q8N7B1 307 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms