RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 HNRNPCL3B7ZW38 293 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 HNRNPCL4P0DMR1 293 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 NTSP30990 170 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 FGF9P31371 208 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GABRA5P31644 462 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PRKAG1P54619 331 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MRPS15P82914 257 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CRTC2Q53ET0 693 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 THOC7Q6I9Y2 204 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CD200R1LQ6Q8B3 271 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 VWA5B2Q8N398 1253 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SYT14Q8NB59 555 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 UFD1Q92890 307 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 BBS4Q96RK4 519 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TM9SF2Q99805 663 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 FAIM2Q9BWQ8 316 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LGR4Q9BXB1 951 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PINK1Q9BXM7 581 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ANKRA2Q9H9E1 313 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GPR52Q9Y2T5 361 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 EXOSC1Q9Y3B2 195 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 IGKV1-8A0A0C4DH67 115 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 A8MV72 311 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LRRTM2O43300 516 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PRKRAO75569 313 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 HMGN2P05204 90 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SERPIND1P05546 499 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LIMS3P0CW19 117 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LIMS4P0CW20 117 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CCL5P13501 91 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC6A11P48066 632 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ANXA11P50995 505 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CDK3Q00526 305 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LASP1Q14847 261 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PPP2R2DQ66LE6 453 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 BHLHB9Q6PI77 547 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ZNF485Q8NCK3 441 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 OR8D4Q8NGM9 314 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 OR52P1PQ8NH57 321 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ARHGAP9Q9BRR9 750 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 YIPF4Q9BSR8 244 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GSTK1Q9Y2Q3 226 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 DENND4AQ7Z401 1863 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GLOD5A6NK44 160 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 KDM4EB2RXH2 506 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 B4DXG7 233 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 UBXN7O94888 489 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 FHP07954 510 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 FABP5Q01469 135 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PRDX1Q06830 199 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CDK10Q15131 360 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 KIAA1161Q6NSJ0 714 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ADCK2Q7Z695 626 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MEX3DQ86XN8 651 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CAMKK1Q8N5S9 505 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ASCC1Q8N9N2 400 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LILRB4Q8NHJ6 448 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SFXN5Q8TD22 340 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GNPDA2Q8TDQ7 276 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 DMRTB1Q96MA1 342 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CAMK1GQ96NX5 476 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC38A2Q96QD8 506 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 DNMT3AQ9Y6K1 912 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MYO10Q9HD67 2058 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MUC22E2RYF6 1773 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PLA2G10O15496 165 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ALPPP05187 535 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC35G4P0C7Q5 338 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PTGER1P34995 402 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 IFNGR2P38484 337 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 P2RY2P41231 377 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CLCNKAP51800 687 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TSPAN31Q12999 210 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.34□□□□□ -0.272e-6■□□□□ 11.2
CDK5RAP3-237ENST00000585163 TMEM35AQ53FP2 167 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PYDC2Q56P42 97 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PRAMEF8Q5VWM4 474 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PRAMEF7Q5VXH5 474 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 QRSL1Q9H0R6 528 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 KLHL31Q9H511 634 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TOR4AQ9NXH8 423 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SMIM30A4D0T7 59 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 A6NL46 340 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SYT5O00445 386 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ERAL1O75616 437 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PCCBP05166 539 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MYL9P24844 172 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TAS2R41P59536 307 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 HTRA4P83105 476 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ZNF234Q14588 700 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC9A5Q14940 896 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GPAT3Q53EU6 434 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 RASSF6Q6ZTQ3 369 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PRICKLE2Q7Z3G6 844 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GALNT12Q8IXK2 581 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ATP6V1C2Q8NEY4 427 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TTLQ8NG68 377 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms