RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-222ENST00000583569 PRSS48Q7RTY5 328 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 ADCK1Q86TW2 530 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 ZNF619Q8N2I2 560 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 HDDC3Q8N4P3 179 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 WDR36Q8NI36 951 aaKnown RBP3.38□□□□□ -1.87
NUP85-222ENST00000583569 TIGARQ9NQ88 270 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 STARD5Q9NSY2 213 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 CNOT2Q9NZN8 540 aaKnown RBP3.38□□□□□ -1.87
NUP85-222ENST00000583569 SENP1Q9P0U3 644 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 IL20RAQ9UHF4 553 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 PURGQ9UJV8 347 aaKnown RBP3.38□□□□□ -1.87
NUP85-222ENST00000583569 ODF2LQ9ULJ1 636 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 ZNF490Q9ULM2 529 aaPredicted RBP3.38□□□□□ -1.87
NUP85-222ENST00000583569 FZR1Q9UM11 496 aa3.38□□□□□ -1.87
NUP85-222ENST00000583569 KLF2Q9Y5W3 355 aaPredicted RBP3.38□□□□□ -1.87
NUP85-222ENST00000583569 MFSD2BA6NFX1 497 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 ZSCAN5CA6NGD5 496 aaPredicted RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 EFCAB7A8K855 629 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 H3BMH7 237 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 SAP18O00422 153 aaKnown RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 ADAM12O43184 909 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 SDC3O75056 442 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 SRSF10O75494 262 aaKnown RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 IGSF6O95976 241 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 TGFAP01135 160 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 IGHV3-9P01782 118 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 GHRP10912 638 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 PVRP15151 417 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 PRDX2P32119 198 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 RFC2P35250 354 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 ATXN3P54252 364 aaPredicted RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 HERVK_113P63132 956 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 ERVK-8P63133 956 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 ZNF85Q03923 595 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 EIF2B1Q14232 305 aaKnown RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 SLC10A1Q14973 349 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 Q1RN00 199 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 TIMM50Q3ZCQ8 353 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 ACSF3Q4G176 576 aaPredicted RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 ATAD3CQ5T2N8 411 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 PRR5LQ6MZQ0 368 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 P4HA3Q7Z4N8 544 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 ERICH1Q86X53 443 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 NAXDQ8IW45 347 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 MRPL43Q8N983 215 aaKnown RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 FCGR1BQ92637 280 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 DLX4Q92988 240 aaPredicted RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 PIWIL1Q96J94 861 aaKnown RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 FAM111AQ96PZ2 611 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 ERVK-6Q9BXR3 956 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 IMPAD1Q9NX62 359 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 NINJ2Q9NZG7 142 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 PRODH2Q9UF12 536 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 RSPH14Q9UHP6 348 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 ZNF107Q9UII5 783 aaPredicted RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 HOOK1Q9UJC3 728 aaKnown RBP3.37□□□□□ -1.87
NUP85-222ENST00000583569 PLEKHA6Q9Y2H5 1048 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 DHRS7Q9Y394 339 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 NAALAD2Q9Y3Q0 740 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 HCFC1P51610 2035 aa3.37□□□□□ -1.87
NUP85-222ENST00000583569 CCT8L1PA6NM43 557 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 NPIPA2E9PIF3 369 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 PDLIM1O00151 329 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 RASGRF2O14827 1237 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 THY1P04216 161 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 WNT2P09544 360 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 HOXB7P09629 217 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 SLC35G4P0C7Q5 338 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 IL10P22301 178 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 PTPN4P29074 926 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 RABIFP47224 123 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 GABPB1Q06547 395 aaPredicted RBP3.36□□□□□ -1.87
NUP85-222ENST00000583569 ZNF33BQ06732 778 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 PDIA5Q14554 519 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
NUP85-222ENST00000583569 ZIC1Q15915 447 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 ZSWIM7Q19AV6 140 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 LRIT3Q3SXY7 679 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 TOR1AIP1Q5JTV8 583 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 BEND6Q5SZJ8 279 aaPredicted RBP3.36□□□□□ -1.87
NUP85-222ENST00000583569 MARC1Q5VT66 337 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 CCBE1Q6UXH8 406 aaPredicted RBP3.36□□□□□ -1.87
NUP85-222ENST00000583569 VITQ6UXI7 678 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 RNF148Q8N7C7 305 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 OR56B1Q8NGI3 324 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 RFESDQ8TAC1 157 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 VN1R17PQ8TDU5 208 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 DQX1Q8TE96 717 aaKnown RBP3.36□□□□□ -1.87
NUP85-222ENST00000583569 SAMD8Q96LT4 415 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 C9orf85Q96MD7 179 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 RANBP9Q96S59 729 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 NMNAT2Q9BZQ4 307 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 RAB17Q9H0T7 212 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 C1orf21Q9H246 121 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 FAM114A2Q9NRY5 505 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 SLC7A10Q9NS82 523 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 GDAP2Q9NXN4 497 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 ABCD2Q9UBJ2 740 aa3.36□□□□□ -1.87
NUP85-222ENST00000583569 PIN4Q9Y237 131 aaKnown RBP3.36□□□□□ -1.87
NUP85-222ENST00000583569 RNF115Q9Y4L5 304 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms