RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 LEG1Q6P5S2 330 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 LRRC8BQ6P9F7 803 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 AFTPHQ6ULP2 937 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 APOOLQ6UXV4 268 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 TSEN54Q7Z6J9 526 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 CCDC71Q8IV32 467 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 CSNK1G2-AS1Q8NCQ2 148 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 OR52B4Q8NGK2 314 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 LHX4Q969G2 390 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 APOOQ9BUR5 198 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 TRIM9Q9C026 710 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 DPH5Q9H2P9 285 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 PNNQ9H307 717 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 ACTR8Q9H981 624 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 COG4Q9H9E3 785 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 IL1RL2Q9HB29 575 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 CENPMQ9NSP4 180 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 TAS2R16Q9NYV7 291 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 KLRF1Q9NZS2 232 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 KLK13Q9UKR3 277 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 KLHDC2Q9Y2U9 406 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 ATP8B3O60423 1300 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 SALL1Q9NSC2 1324 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 A0A087WZY1 265 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 A0A0J9YVX5 310 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 TEX48A0A1B0GUV7 120 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 A0A1W2PPR1 153 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 TRIM49BA6NDI0 452 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ALOX15BO15296 676 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 VPS26AO75436 327 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 PTBP3O95758 552 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 IGHV3-13P01766 116 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 KRT6BP04259 564 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 HOXD4P09016 255 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 FUT1P19526 365 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 AXLP30530 894 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 SAA4P35542 130 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 TRIM23P36406 574 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 KRT6CP48668 564 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 GSK3BP49841 420 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 PRELPP51888 382 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 NAPAP54920 295 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 MFAP2P55001 183 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 VCPP55072 806 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 NAAAQ02083 359 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 FUT7Q11130 342 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ZP4Q12836 540 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 EIF2B1Q14232 305 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 CD226Q15762 336 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 CNPY1Q3B7I2 92 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 LDLRAP1Q5SW96 308 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 DMKNQ6E0U4 476 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ZCCHC12Q6PEW1 402 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 NET1Q7Z628 596 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 CEACAM19Q7Z692 300 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 SLC47A2Q86VL8 602 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ERICH1Q86X53 443 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ARFGAP2Q8N6H7 521 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 TOMM40LQ969M1 308 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 TTYH2Q9BSA4 534 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 CCDC28BQ9BUN5 200 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 CARD6Q9BX69 1037 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 TSPY26PQ9H489 355 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ALG9Q9H6U8 611 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 GDAP2Q9NXN4 497 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 GPR83Q9NYM4 423 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 RAI14Q9P0K7 980 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ATXN10Q9UBB4 475 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 P2RX2Q9UBL9 471 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 MLXQ9UH92 298 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ATP6V1HQ9UI12 483 aa2.98□□□□□ -1.93
SMCHD1-209ENST00000583441 ABCC4O15439 1325 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 IGHV3OR16-12A0A075B7B8 117 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 TTC26A0AVF1 554 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 RNF222A6NCQ9 220 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 ACOD1A6NK06 481 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 KRTAP16-1A8MUX0 517 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 WASH3PC4AMC7 463 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 NDC80O14777 642 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 SH3BGRLO75368 114 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 TOXO94900 526 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 MFN2O95140 757 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 OAS1P00973 400 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 HEXBP07686 556 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 ANXA4P09525 319 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 THRBP10828 461 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 PTPN4P29074 926 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 ACAA2P42765 397 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 BRCC3P46736 316 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 SLC8A3P57103 927 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 MRPS6P82932 125 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 CD300CQ08708 224 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 TMEM44Q2T9K0 475 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 C14orf28Q4W4Y0 310 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 CYBRD1Q53TN4 286 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 ACER2Q5QJU3 275 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 RIPPLY2Q5TAB7 128 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 WASH2PQ6VEQ5 465 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 GPRIN3Q6ZVF9 776 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms