RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 C15orf38-AP3S2A0A0A6YYH1 394 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 LOC100653049A0A140TA62 436 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 A0A1W2PQF6 199 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 LRRIQ4A6NIV6 560 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 MAGEB17A8MXT2 336 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 CDRT15L2A8MXV6 281 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 KPNA7A9QM74 516 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 ANKRD66B4E2M5 251 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 G3V2L1 256 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 H3BSA7 217 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 AP3B1O00203 1094 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 HDAC3O15379 428 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 ZBTB14O43829 449 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 HS6ST1O60243 411 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 NDUFS3O75489 264 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 LYPLA1O75608 230 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 TRMUO75648 421 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 CABYRO75952 493 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 KRT34O76011 436 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 OR6B1O95007 311 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 BMP10O95393 424 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 LIPFP07098 398 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 P4HA1P13674 534 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 TMEM11P17152 192 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 DESP17661 470 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 PGAM1P18669 254 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 NCF2P19878 526 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 HLA-DPA1P20036 260 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 PIK3R1P27986 724 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 SERPINB6P35237 376 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 SPRP35270 261 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 RANBP1P43487 201 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 NPY2RP49146 381 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 CAMPP49913 170 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 RPL14P50914 215 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 CSE1LP55060 971 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 F2RL1P55085 397 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 NUP107P57740 925 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 RPL10AP62906 217 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 MS4A2Q01362 244 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 PPIDQ08752 370 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 LAMTOR4Q0VGL1 99 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 DPYSQ14117 519 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 PAFAH1B3Q15102 231 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 C15orf59Q2T9L4 293 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 SMU1Q2TAY7 513 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 MDH1BQ5I0G3 518 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 RARS2Q5T160 578 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 CST9LP1Q5W188 147 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 KIAA0930Q6ICG6 404 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 OR6B2Q6IFH4 312 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 LCN10Q6JVE6 187 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 BHLHB9Q6PI77 547 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 HACD2Q6Y1H2 254 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 ZCCHC23Q6ZST2 131 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 STRADAQ7RTN6 431 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 PIWIL3Q7Z3Z3 882 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 BNIPLQ7Z465 357 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 ARPINQ7Z6K5 226 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 ZBTB8OSQ8IWT0 167 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF843Q8N446 348 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 MINDY1Q8N5J2 469 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 COLGALT1Q8NBJ5 622 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 OR1J2Q8NGS2 313 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 OR2T6Q8NHC8 308 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 HTR3CQ8WXA8 447 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 MMABQ96EY8 250 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF597Q96LX8 424 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 SPATA13Q96N96 652 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 DGAT2Q96PD7 388 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 QKIQ96PU8 341 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 CDRT15Q96T59 188 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 RBBP8Q99708 897 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 SRSF8Q9BRL6 282 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 TCHPQ9BT92 498 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 OSBPL11Q9BXB4 747 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 FTHL17Q9BXU8 183 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 YTHDF1Q9BYJ9 559 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 MTMR12Q9C0I1 747 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 IL22Q9GZX6 179 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 OSGEPL1Q9H4B0 414 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 RPF1Q9H9Y2 349 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 PLGRKTQ9HBL7 147 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 FAIMQ9NVQ4 179 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 HOXC10Q9NYD6 342 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 ANAPC2Q9UJX6 822 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 AP4B1Q9Y6B7 739 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 SCN4AP35499 1836 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 LOC100509620A0A075B734 347 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 A0A0J9YVX5 310 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 TCRBV3S1A0A5B6 114 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 KANSL1LA0AUZ9 987 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CLRN2A0PK11 232 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SH3PXD2BA1X283 911 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 MEIOCA2RUB1 952 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 OR2A25A4D2G3 310 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 H3BNH8 94 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms