RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PON3Q15166 354 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 TSC22D1Q15714 1073 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 KCTD19Q17RG1 926 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 C18orf21Q32NC0 220 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 C18orf63Q68DL7 685 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 CASC4Q6P4E1 433 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 PALM2Q8IXS6 379 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 ST13P4Q8IZP2 240 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 ZNF615Q8N8J6 731 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 ACOT4Q8N9L9 421 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 TTLQ8NG68 377 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 KAT2AQ92830 837 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 RHBDF1Q96CC6 855 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 ADAD1Q96M93 576 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 NT5DC2Q9H857 520 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 CISD1Q9NZ45 108 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 MOCS1Q9NZB8 636 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 IFNKQ9P0W0 207 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 GPR52Q9Y2T5 361 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 MRPS18CQ9Y3D5 142 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 ZNF175Q9Y473 711 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 COMMD10Q9Y6G5 202 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 KCNE2Q9Y6J6 123 aa6.84□□□□□ -1.31
SMARCE1-217ENST00000580654 IGHV4-61A0A0C4DH41 118 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 ZCWPW2A0A1B0GU75 182 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 DYRK3O43781 588 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 DLX3O60479 287 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 CDH16O75309 829 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 UGT2B11O75310 529 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 GCM2O75603 506 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 TGFAP01135 160 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 PEPDP12955 493 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 IL11P20809 199 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 HIST1H1TP22492 207 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 CNTFP26441 200 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 GSTM2P28161 218 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 CETN2P41208 172 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 GDF5P43026 501 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 SLC6A8P48029 635 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 KCNC1P48547 511 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 RGS4P49798 205 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 CLDN20P56880 219 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 SNTA1Q13424 505 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 DHX34Q14147 1143 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 GGTLC2Q14390 218 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 TAB1Q15750 504 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 PPP1R3AQ16821 1122 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 RBM20Q5T481 1227 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 CHMP1BQ7LBR1 199 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 PLCZ1Q86YW0 608 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 CNPY4Q8N129 248 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 ZNF619Q8N2I2 560 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 LRRC17Q8N6Y2 441 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 OR6K3Q8NGY3 331 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 GCDHQ92947 438 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 RIT1Q92963 219 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 ZNF669Q96BR6 464 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 KCNC2Q96PR1 638 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 HBEGFQ99075 208 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 TACO1Q9BSH4 297 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 SORBS1Q9BX66 1292 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 NXF5Q9H1B4 397 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 RPF2Q9H7B2 306 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 KLRF1Q9NZS2 232 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 PAK5Q9P286 719 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 FBXO5Q9UKT4 447 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 CLEC4AQ9UMR7 237 aa6.83□□□□□ -1.32
SMARCE1-217ENST00000580654 A0A0A6YYJ9 748 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 PRAMEF25A6NGN4 478 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 ANKDD1BA6NHY2 528 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 SLCO1B7G3V0H7 640 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 SEC14L5O43304 696 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 SS18L1O75177 396 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 H2AFYO75367 372 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 APEHP13798 732 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 CREB1P16220 341 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 NAGAP17050 411 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 GNAZP19086 355 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 CD22P20273 847 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 GPX3P22352 226 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 ADH6P28332 368 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 GABRB3P28472 473 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 GALNSP34059 522 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 HNRNPH2P55795 449 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 NRG3P56975 720 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 IRF9Q00978 393 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 HMGCS1Q01581 520 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 TNFRSF17Q02223 184 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 BIKQ13323 160 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 DOC2AQ14183 400 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 RAB35Q15286 201 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 NNATQ16517 81 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 TUSC1Q2TAM9 212 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 AWAT1Q58HT5 328 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 AGAP6Q5VW22 663 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 HLA-DQA1Q5Y7H0 255 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 OR5M10Q6IEU7 315 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 BEND4Q6ZU67 534 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms