RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 KAT2AQ92830 837 aa18.46■□□□□ 0.55
SMG8-204ENST00000580498 COL21A1Q96P44 957 aa18.46■□□□□ 0.55
SMG8-204ENST00000580498 FAM111AQ96PZ2 611 aa18.46■□□□□ 0.55
SMG8-204ENST00000580498 SLC24A3Q9HC58 644 aa18.46■□□□□ 0.55
SMG8-204ENST00000580498 TMED5Q9Y3A6 229 aa18.46■□□□□ 0.55
SMG8-204ENST00000580498 NOTCH2Q04721 2471 aa18.46■□□□□ 0.55
SMG8-204ENST00000580498 OR6C70A6NIJ9 312 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 LRRC3CA6NJW4 275 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 TO15178 435 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 PLOD3O60568 738 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 CELA3AP09093 270 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 PRPH2P23942 346 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 MAPK1P28482 360 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 GRNP28799 593 aaKnown RBP18.45■□□□□ 0.54
SMG8-204ENST00000580498 EMDP50402 254 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 CEBPEQ15744 281 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 CLEC6AQ6EIG7 209 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 RNF165Q6ZSG1 346 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 NCCRP1Q6ZVX7 275 aaPredicted RBP18.45■□□□□ 0.54
SMG8-204ENST00000580498 DDIASQ8IXT1 998 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 PPP1R14CQ8TAE6 165 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 AENQ8WTP8 325 aaKnown RBP18.45■□□□□ 0.54
SMG8-204ENST00000580498 C11orf24Q96F05 449 aaPredicted RBP18.45■□□□□ 0.54
SMG8-204ENST00000580498 LRRC46Q96FV0 321 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 BTBD9Q96Q07 612 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 GATA5Q9BWX5 397 aaPredicted RBP18.45■□□□□ 0.54
SMG8-204ENST00000580498 C3orf14Q9HBI5 128 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 DDX18Q9NVP1 670 aaKnown RBP18.45■□□□□ 0.54
SMG8-204ENST00000580498 TAS2R7Q9NYW3 318 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 DTX4Q9Y2E6 619 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 GPR55Q9Y2T6 319 aaPredicted RBP18.45■□□□□ 0.54
SMG8-204ENST00000580498 C15orf41Q9Y2V0 281 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 PHF3Q92576 2039 aaKnown RBP18.45■□□□□ 0.54
SMG8-204ENST00000580498 CACNA1CQ13936 2221 aa18.45■□□□□ 0.54
SMG8-204ENST00000580498 A0A087WV62 115 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 PRAMEF25A6NGN4 478 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 GNB5O14775 395 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 ZNF500O60304 480 aaPredicted RBP18.44■□□□□ 0.54
SMG8-204ENST00000580498 JUNP05412 331 aaKnown RBP18.44■□□□□ 0.54
SMG8-204ENST00000580498 SNRPB2P08579 225 aaKnown RBP18.44■□□□□ 0.54
SMG8-204ENST00000580498 RFPL3SP0C7P2 107 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 GPC1P35052 558 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 ASMTP46597 345 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 ZFP36L2P47974 494 aaKnown RBP18.44■□□□□ 0.54
SMG8-204ENST00000580498 TRPC1P48995 793 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 CDK9P50750 372 aaKnown RBP18.44■□□□□ 0.54
SMG8-204ENST00000580498 PSMD4P55036 377 aaKnown RBP18.44■□□□□ 0.54
SMG8-204ENST00000580498 NUP107P57740 925 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 TIGD3Q6B0B8 471 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 FAM71E1Q6IPT2 247 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 ANGPTL8Q6UXH0 198 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 CROCCP2Q86T23 111 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 CLYBLQ8N0X4 340 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 LILRB4Q8NHJ6 448 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 CCT7Q99832 543 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 SLC6A15Q9H2J7 730 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 C12orf65Q9H3J6 166 aaKnown RBP18.44■□□□□ 0.54
SMG8-204ENST00000580498 FOLH1BQ9HBA9 442 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 PROK2Q9HC23 129 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 RNF6Q9Y252 685 aa18.44■□□□□ 0.54
SMG8-204ENST00000580498 EXPH5Q8NEV8 1989 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 TTC36A6NLP5 189 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 FAM90A27PA6NNH2 459 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 AHRRA9YTQ3 701 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 MYO1GB0I1T2 1018 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 TMEM114B3SHH9 223 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 HPNP05981 417 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 ALDH3A1P30838 453 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 SSTR2P30874 369 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 RPL3P39023 403 aaKnown RBP18.43■□□□□ 0.54
SMG8-204ENST00000580498 CLK3P49761 638 aaKnown RBP18.43■□□□□ 0.54
SMG8-204ENST00000580498 DUSP2Q05923 314 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 DUSP8Q13202 625 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 KRT71Q3SY84 523 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 EMC4Q5J8M3 183 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 R3HCC1LQ7Z5L2 792 aaKnown RBP18.43■□□□□ 0.54
SMG8-204ENST00000580498 SLC44A2Q8IWA5 706 aaPredicted RBP18.43■□□□□ 0.54
SMG8-204ENST00000580498 TCP10LQ8TDR4 215 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 TMBIM1Q969X1 311 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 PPCDCQ96CD2 204 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 GNRHR2Q96P88 292 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 TTYH2Q9BSA4 534 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 Q9N2J8 555 aa18.43■□□□□ 0.54
SMG8-204ENST00000580498 NPIPB8E9PQR5 432 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 RGS16O15492 202 aaPredicted RBP18.42■□□□□ 0.54
SMG8-204ENST00000580498 PDPK1O15530 556 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 SPAG7O75391 227 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 CBR3O75828 277 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 MYZAPP0CAP1 466 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 PNLIPRP2P54317 469 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 RPL38P63173 70 aaKnown RBP18.42■□□□□ 0.54
SMG8-204ENST00000580498 KANK2Q63ZY3 851 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 BICRALQ6AI39 1079 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 LARP4Q71RC2 724 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMG8-204ENST00000580498 MREGQ8N565 214 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 ZBED6CLQ96FA7 236 aaPredicted RBP18.42■□□□□ 0.54
SMG8-204ENST00000580498 SLC35A4Q96G79 324 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 PPP3R2Q96LZ3 170 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 SPOCK3Q9BQ16 436 aa18.42■□□□□ 0.54
SMG8-204ENST00000580498 HHATLQ9HCP6 504 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms