RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SKP1P63208 163 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 CXADRP78310 365 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 OCA2Q04671 838 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 MAP4K2Q12851 820 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 GAB1Q13480 694 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 RCAN2Q14206 197 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 MLC1Q15049 377 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 EBPQ15125 230 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ELAVL1Q15717 326 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 NSDHLQ15738 373 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 GALNTL6Q49A17 601 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 MINDY4Q4G0A6 757 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ATP6AP1LQ52LC2 224 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PDCD4Q53EL6 469 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SPDYAQ5MJ70 313 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 FAAH2Q6GMR7 532 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PAPD4Q6PIY7 484 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 C19orf48Q6RUI8 117 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 FAM111BQ6SJ93 734 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 CYP20A1Q6UW02 462 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 NDUFAF7Q7L592 441 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PAGE2Q7Z2X7 111 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PIGWQ7Z7B1 504 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 RAB43Q86YS6 212 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 TICAM1Q8IUC6 712 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 HOMEZQ8IX15 550 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 MSRB3Q8IXL7 192 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 C9orf40Q8IXQ3 194 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 DDIASQ8IXT1 998 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ST13P4Q8IZP2 240 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 KIRREL3Q8IZU9 778 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 OR2L13Q8N349 312 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ARFGAP2Q8N6H7 521 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 B3GNT7Q8NFL0 401 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 FDCSPQ8NFU4 85 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 OR7G2Q8NG99 324 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 OR7A2PQ8NGA2 310 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 OR8J2Q8NGG1 315 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 OR9I1Q8NGQ6 314 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PPP1R14CQ8TAE6 165 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 M1APQ8TC57 530 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC2A12Q8TD20 617 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 DOK4Q8TEW6 326 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SREK1Q8WXA9 508 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 TANKQ92844 425 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ADIPOR1Q96A54 375 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 CIDECQ96AQ7 238 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 KIAA1143Q96AT1 154 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PPWD1Q96BP3 646 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 TESCQ96BS2 214 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 TUBGCP3Q96CW5 907 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 MTERF3Q96E29 417 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 FBXL20Q96IG2 436 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 MARK4Q96L34 752 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PPP1R36Q96LQ0 422 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PTCHD1Q96NR3 888 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 AMDHD1Q96NU7 426 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 TSSK3Q96PN8 268 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SMAD5Q99717 465 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 TUBB6Q9BUF5 446 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 CCDC28BQ9BUN5 200 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 EFHD1Q9BUP0 239 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ALOXE3Q9BYJ1 711 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC7A5P2Q9GIP4 190 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 WNT10AQ9GZT5 417 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 GLIPR2Q9H4G4 154 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SERHL2Q9H4I8 314 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 REEP4Q9H6H4 257 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 EPS8L2Q9H6S3 715 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 TRIM45Q9H8W5 580 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ANKRA2Q9H9E1 313 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF160Q9HCG1 818 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 MMP25Q9NPA2 562 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC35C2Q9NQQ7 365 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 RIC8BQ9NVN3 520 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 AHSPQ9NZD4 102 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ING1Q9UK53 422 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 POLHQ9Y253 713 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 WBP11Q9Y2W2 641 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PCDHGA9Q9Y5G4 932 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 CSAG2Q9Y5P2 127 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 COPG1Q9Y678 874 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 GMEB1Q9Y692 573 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 FLNCQ14315 2725 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 HCFC1P51610 2035 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF462Q96JM2 2506 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 POLEQ07864 2286 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CACNA1CQ13936 2221 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 TENM4Q6N022 2769 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 A0A087WV62 115 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 NSG1A0A0A6YYJ2 146 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 GNG14A0A1W2PPG7 69 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SH3D21A4FU49 640 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 TRPC5OSA6NMA1 111 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 C17orf105B2RV13 164 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 FXYD1O00168 92 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 UPK1AO00322 258 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 AKAP10O43572 662 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SNX3O60493 162 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 PLOD3O60568 738 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms