RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 POLR1BQ9H9Y6 1135 aa10.42□□□□□ -0.74
SKA2-204ENST00000578519 SERTAD3Q9UJW9 196 aa10.42□□□□□ -0.74
SKA2-204ENST00000578519 ACAD8Q9UKU7 415 aa10.42□□□□□ -0.74
SKA2-204ENST00000578519 MYO10Q9HD67 2058 aa10.42□□□□□ -0.74
SKA2-204ENST00000578519 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 SH3D21A4FU49 640 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 FITM1A5D6W6 292 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 ZNF860A6NHJ4 632 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 SLC1A7O00341 560 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 TOX3O15405 576 aaPredicted RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 LAMTOR5O43504 91 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 FGF17O60258 216 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 OR10H3O60404 316 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 FAM20BO75063 409 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 RDH16O75452 317 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 DCNP07585 359 aaKnown RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 OSMP13725 252 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 IL7RP16871 459 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 CBLP22681 906 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 ELK4P28324 431 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 PIGAP37287 484 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 CTSKP43235 329 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 DHPSP49366 369 aaPredicted RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 CLK3P49761 638 aaKnown RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 CRISP1P54107 249 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 CDH15P55291 814 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 TAS2R41P59536 307 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 OLR1P78380 273 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 POU6F2P78424 691 aaPredicted RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 HSD11B2P80365 405 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 ALDH6A1Q02252 535 aaKnown RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 SLC13A2Q13183 592 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 DUSP8Q13202 625 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 DYNC1I2Q13409 638 aaKnown RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 PUM1Q14671 1186 aaKnown RBP eCLIP10.41□□□□□ -0.74
SKA2-204ENST00000578519 GANABQ14697 944 aaKnown RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 NR1D2Q14995 579 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 MAD2L1BPQ15013 274 aaPredicted RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 LTB4RQ15722 352 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 MAPK11Q15759 364 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 MLIPQ5VWP3 458 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 TCTN3Q6NUS6 607 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 Q7L0L9 218 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 TSEN54Q7Z6J9 526 aaKnown RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 OR4N5Q8IXE1 308 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 GALNT12Q8IXK2 581 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 ZNF619Q8N2I2 560 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 AQP11Q8NBQ7 271 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 OR9A4Q8NGU2 314 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 GNPDA2Q8TDQ7 276 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 APOBEC4Q8WW27 367 aaKnown RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 TRUB1Q8WWH5 349 aaKnown RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 FCGR1BQ92637 280 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 MMABQ96EY8 250 aaPredicted RBP10.41□□□□□ -0.74
SKA2-204ENST00000578519 GIMAP5Q96F15 307 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 CSF3RQ99062 836 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 ARHGDIGQ99819 225 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 CCDC90BQ9GZT6 254 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 SLC38A1Q9H2H9 487 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 CXorf21Q9HAI6 301 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 FAM60AQ9NP50 221 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 ADAP2Q9NPF8 381 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 ENAMQ9NRM1 1142 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 PLCXD1Q9NUJ7 323 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 C14orf105Q9NVL8 296 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 CLN6Q9NWW5 311 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 PRODH2Q9UF12 536 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 GMEB2Q9UKD1 530 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 CFL2Q9Y281 166 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 MMACHCQ9Y4U1 282 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 LRP4O75096 1905 aa10.41□□□□□ -0.74
SKA2-204ENST00000578519 HEATR5BQ9P2D3 2071 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 DSPPQ9NZW4 1301 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 A0A0A6YYC8 382 aaPredicted RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 A0A1B0GVT2 93 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 SNTNA6NMZ2 147 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 VGLL3A8MV65 326 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 I3L1I5 382 aaPredicted RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 J3KTA2 159 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 PCDH17O14917 1159 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 ZNF749O43361 778 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 RGS10O43665 173 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 LDB3O75112 727 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 NME6O75414 186 aaPredicted RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 CYP4B1P13584 511 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 BCKDHBP21953 392 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 RGS8P57771 180 aaPredicted RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 CHRNEQ04844 493 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 DUSP2Q05923 314 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 ZNF155Q12901 538 aaPredicted RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 ILKQ13418 452 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 LAPTM4AQ15012 233 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 PRICKLE4Q2TBC4 344 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 FHL5Q5TD97 284 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 PRPF38BQ5VTL8 546 aaKnown RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 WDR74Q6RFH5 385 aaPredicted RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 ISLR2Q6UXK2 745 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 CASP12Q6UXS9 341 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 CD300LDQ6UXZ3 194 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 ERI1Q8IV48 349 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms