RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 MAGED4Q96JG8 741 aa25.48■■□□□ 1.67
SCARF1-207ENST00000573867 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.48■■□□□ 1.67
SCARF1-207ENST00000573867 A0A087WV62 115 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 A0A1B0GTH9 108 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 A0A1B0GUH1 482 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 CAPN14A8MX76 684 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 UPK1AO00322 258 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 ACOX3O15254 700 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 PDPK1O15530 556 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 PSMG1O95456 288 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 RFPL3SP0C7P2 107 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 FRKP42685 505 aaPredicted RBP25.47■■□□□ 1.67
SCARF1-207ENST00000573867 ASMTP46597 345 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 SLC18A1P54219 525 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 DCAF7P61962 342 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 KCNJ2P63252 427 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 IL23RQ5VWK5 629 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 SLC22A16Q86VW1 577 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 FNDC5Q8NAU1 212 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 ELP4Q96EB1 424 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 PNPOQ9NVS9 261 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 SH3BP4Q9P0V3 963 aa25.47■■□□□ 1.67
SCARF1-207ENST00000573867 C19orf53Q9UNZ5 99 aaPredicted RBP25.47■■□□□ 1.67
SCARF1-207ENST00000573867 SPTAN1Q13813 2472 aaKnown RBP25.47■■□□□ 1.67
SCARF1-207ENST00000573867 ANKRD33BA6NCL7 494 aa25.46■■□□□ 1.67
SCARF1-207ENST00000573867 TRIM3O75382 744 aaPredicted RBP25.46■■□□□ 1.67
SCARF1-207ENST00000573867 ERN1O75460 977 aaKnown RBP25.46■■□□□ 1.67
SCARF1-207ENST00000573867 EFNA1P20827 205 aaPredicted RBP25.46■■□□□ 1.67
SCARF1-207ENST00000573867 TMED10P49755 219 aaKnown RBP25.46■■□□□ 1.67
SCARF1-207ENST00000573867 RPL14P50914 215 aaKnown RBP25.46■■□□□ 1.67
SCARF1-207ENST00000573867 PLCXD2Q0VAA5 305 aa25.46■■□□□ 1.67
SCARF1-207ENST00000573867 OR2L13Q8N349 312 aa25.46■■□□□ 1.67
SCARF1-207ENST00000573867 NODALQ96S42 347 aa25.46■■□□□ 1.67
SCARF1-207ENST00000573867 DOHHQ9BU89 302 aa25.46■■□□□ 1.67
SCARF1-207ENST00000573867 ATP6V1HQ9UI12 483 aa25.46■■□□□ 1.67
SCARF1-207ENST00000573867 ACOT7O00154 380 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 TP53I11O14683 189 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 SCAMP2O15127 329 aaKnown RBP25.45■■□□□ 1.66
SCARF1-207ENST00000573867 ZG16O60844 167 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 UGT2B11O75310 529 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 NAGAP17050 411 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 MAPK1P28482 360 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 CASP3P42574 277 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 CDK9P50750 372 aaKnown RBP25.45■■□□□ 1.66
SCARF1-207ENST00000573867 HSPB3Q12988 150 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.45■■□□□ 1.66
SCARF1-207ENST00000573867 AGBL2Q5U5Z8 902 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 FNDC7Q5VTL7 733 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 RGS9BPQ6ZS82 235 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 SLC34A3Q8N130 599 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 FAM109AQ8N4B1 249 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 OR7A2PQ8NGA2 310 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 OR4N2Q8NGD1 307 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 TMBIM1Q969X1 311 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 SECISBP2Q96T21 854 aaKnown RBP25.45■■□□□ 1.66
SCARF1-207ENST00000573867 ANGPTL4Q9BY76 406 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 ZNF703Q9H7S9 590 aaPredicted RBP25.45■■□□□ 1.66
SCARF1-207ENST00000573867 AKTIPQ9H8T0 292 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 ZFP64Q9NPA5 681 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 TAS2R9Q9NYW1 312 aa25.45■■□□□ 1.66
SCARF1-207ENST00000573867 A1L4Q6 167 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 SLITRK5O94991 958 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 H2AFXP16104 143 aaPredicted RBP25.44■■□□□ 1.66
SCARF1-207ENST00000573867 ABOP16442 354 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 PTGDSP41222 190 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 PSG6Q00889 435 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 ZNF155Q12901 538 aaPredicted RBP25.44■■□□□ 1.66
SCARF1-207ENST00000573867 WDR53Q7Z5U6 358 aaPredicted RBP25.44■■□□□ 1.66
SCARF1-207ENST00000573867 KRTCAP2Q8N6L1 136 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 MTERF3Q96E29 417 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 RILPQ96NA2 401 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 DDX18Q9NVP1 670 aaKnown RBP25.44■■□□□ 1.66
SCARF1-207ENST00000573867 HRH3Q9Y5N1 445 aa25.44■■□□□ 1.66
SCARF1-207ENST00000573867 CCL21O00585 134 aa25.43■■□□□ 1.66
SCARF1-207ENST00000573867 COQ9O75208 318 aa25.43■■□□□ 1.66
SCARF1-207ENST00000573867 SNNO75324 88 aaPredicted RBP25.43■■□□□ 1.66
SCARF1-207ENST00000573867 SNUPNO95149 360 aaKnown RBP25.43■■□□□ 1.66
SCARF1-207ENST00000573867 CLDN1O95832 211 aa25.43■■□□□ 1.66
SCARF1-207ENST00000573867 IGHG3P01860 377 aa25.43■■□□□ 1.66
SCARF1-207ENST00000573867 NCCRP1Q6ZVX7 275 aaPredicted RBP25.43■■□□□ 1.66
SCARF1-207ENST00000573867 NUP54Q7Z3B4 507 aa25.43■■□□□ 1.66
SCARF1-207ENST00000573867 DOLPP1Q86YN1 238 aa25.43■■□□□ 1.66
SCARF1-207ENST00000573867 SLC44A2Q8IWA5 706 aaPredicted RBP25.43■■□□□ 1.66
SCARF1-207ENST00000573867 CCDC120Q96HB5 630 aa25.43■■□□□ 1.66
SCARF1-207ENST00000573867 BOKQ9UMX3 212 aaPredicted RBP25.43■■□□□ 1.66
SCARF1-207ENST00000573867 NCKAP5O14513 1909 aa25.43■■□□□ 1.66
SCARF1-207ENST00000573867 TSPAN2O60636 221 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 IFI6P09912 130 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 LAMP1P11279 417 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 G6PDP11413 515 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 PRPS2P11908 318 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 PTGS2P35354 604 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 HPCAL1P37235 193 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 EMX2Q04743 252 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 TTMPQ5BVD1 217 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 TBCELQ5QJ74 424 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 HIST2H2BCQ6DN03 193 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 C3P1Q6ZMU1 363 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 TRILQ7L0X0 811 aa25.42■■□□□ 1.66
SCARF1-207ENST00000573867 RIMKLAQ8IXN7 391 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms