RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 AICDAQ9GZX7 198 aa17.94■□□□□ 0.46
SCARF1-206ENST00000573852 BCL2L10Q9HD36 194 aa17.94■□□□□ 0.46
SCARF1-206ENST00000573852 TAS2R7Q9NYW3 318 aa17.94■□□□□ 0.46
SCARF1-206ENST00000573852 EXOSC1Q9Y3B2 195 aaKnown RBP17.94■□□□□ 0.46
SCARF1-206ENST00000573852 SHISA3A0PJX4 238 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 UBXN7O94888 489 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ALX3O95076 343 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 HLA-DQB1P01920 261 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 STATHP02808 62 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ADH1AP07327 375 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 PSKH1P11801 424 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ALAS2P22557 587 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 NCBP2P52298 156 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCARF1-206ENST00000573852 NTHL1P78549 312 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 EFR3AQ14156 821 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 INSL4Q14641 139 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ANKRD33Q7Z3H0 272 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ZNF764Q96H86 408 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ATF6BQ99941 703 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 HDHD5Q9BXW7 423 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 DDX31Q9H8H2 851 aaKnown RBP17.93■□□□□ 0.46
SCARF1-206ENST00000573852 KCNE3Q9Y6H6 103 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 MYO10Q9HD67 2058 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 NOTCH4Q99466 2003 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 TRDV1A0A1B0GX56 115 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 A0A1W2PPV9 198 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 KDM4EB2RXH2 506 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-206ENST00000573852 KIAA0355O15063 1070 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 FRS3O43559 492 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 VEGFDO43915 354 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 PRNPP04156 253 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 PPM1AP35813 382 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ST8SIA6P61647 398 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 DPTQ07507 201 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 LASP1Q14847 261 aaKnown RBP17.93■□□□□ 0.46
SCARF1-206ENST00000573852 CLPPQ16740 277 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-206ENST00000573852 TRIQKQ629K1 86 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 OR4C11Q6IEV9 310 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 AMZ2Q86W34 360 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 C19orf18Q8NEA5 215 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 OR4F15Q8NGB8 312 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 SENP5Q96HI0 755 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-206ENST00000573852 C17orf62Q9BQA9 187 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 TMED9Q9BVK6 235 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 SLC35C2Q9NQQ7 365 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 CREBZFQ9NS37 354 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ACOXLQ9NUZ1 547 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 ALG5Q9Y673 324 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 CLCA3PQ9Y6N3 262 aa17.93■□□□□ 0.46
SCARF1-206ENST00000573852 A0A0A6YYD5 115 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 IRGMA1A4Y4 181 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 FAM170BA6NMN3 283 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 HCN1O60741 890 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 CCNYL3P0C7X3 344 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 SLC1A3P43003 542 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 KHKP50053 298 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 ZNF750Q32MQ0 723 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 TCEAL5Q5H9L2 206 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 ZNF793Q6ZN11 406 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 ARIH2OSQ8N7S6 290 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 OR5K2Q8NHB8 316 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 NXPE3Q969Y0 559 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 SPATA5L1Q9BVQ7 753 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 TBC1D17Q9HA65 648 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 RPRD1BQ9NQG5 326 aaKnown RBP17.92■□□□□ 0.46
SCARF1-206ENST00000573852 CLCA2Q9UQC9 943 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 SNTNA6NMZ2 147 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 CH25HO95992 272 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 FGBP02675 491 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 RHOP08100 348 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 EPHA5P54756 1037 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 ZNF155Q12901 538 aaPredicted RBP17.92■□□□□ 0.46
SCARF1-206ENST00000573852 DHCR24Q15392 516 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 TCTE3Q8IZS6 198 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 GNPDA2Q8TDQ7 276 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 KLK6Q92876 244 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 C16orf58Q96GQ5 468 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 FAM46AQ96IP4 442 aaKnown RBP17.92■□□□□ 0.46
SCARF1-206ENST00000573852 DEFB118Q96PH6 123 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 GIMAP4Q9NUV9 329 aa17.92■□□□□ 0.46
SCARF1-206ENST00000573852 RBFOX1Q9NWB1 397 aaKnown RBP17.92■□□□□ 0.46
SCARF1-206ENST00000573852 GPR55Q9Y2T6 319 aaPredicted RBP17.92■□□□□ 0.46
SCARF1-206ENST00000573852 DNMT3AQ9Y6K1 912 aaPredicted RBP17.92■□□□□ 0.46
SCARF1-206ENST00000573852 FAM25AB3EWG3 89 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 FAM25CB3EWG5 89 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 FAM25GB3EWG6 89 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 HMGN2P05204 90 aaKnown RBP17.91■□□□□ 0.46
SCARF1-206ENST00000573852 FAM157BP0CG42 384 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 ADRB3P13945 408 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 DDX6P26196 483 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCARF1-206ENST00000573852 EVX1P49640 407 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 CHRNEQ04844 493 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 DUSP2Q05923 314 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 ARHGAP19Q14CB8 494 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 FAM214AQ32MH5 1076 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 ARHGAP15Q53QZ3 475 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 FAM46CQ5VWP2 391 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 TMEM145Q8NBT3 493 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 SUN3Q8TAQ9 357 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 ZG16BQ96DA0 208 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms