RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 RCC2Q9P258 522 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-210ENST00000572787 LNPEPQ9UIQ6 1025 aa4.62□□□□□ -1.67
TOPBP1-210ENST00000572787 SCML1Q9UN30 329 aa4.62□□□□□ -1.67
TOPBP1-210ENST00000572787 ZFR2Q9UPR6 939 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-210ENST00000572787 RNF6Q9Y252 685 aa4.62□□□□□ -1.67
TOPBP1-210ENST00000572787 B3GALT5Q9Y2C3 310 aa4.62□□□□□ -1.67
TOPBP1-210ENST00000572787 STARD10Q9Y365 291 aa4.62□□□□□ -1.67
TOPBP1-210ENST00000572787 GRIN2DO15399 1336 aa4.62□□□□□ -1.67
TOPBP1-210ENST00000572787 LOC105371267A0A1B0GV96 52 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 BCLAF3A2AJT9 711 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 TMEM213A2RRL7 107 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CLEC18AA5D8T8 446 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 FABP12A6NFH5 140 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 LRRN3E7EW58 273 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 PGRMC1O00264 195 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CYB561D2O14569 222 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 EMC8O43402 210 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 LDB2O43679 373 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CNOT3O75175 753 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 RGS11O94810 467 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 RAB3DO95716 219 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 IFNA14P01570 189 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 PIGRP01833 764 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 IFNA6P05013 189 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 GPIP06744 558 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 DCNP07585 359 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 IL6RP08887 468 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CTSAP10619 480 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ATP1B2P14415 290 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 UQCRBP14927 111 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 MSH3P20585 1137 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 MAOAP21397 527 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CD82P27701 267 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 MPLP40238 635 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 MAGEA2P43356 314 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 UCNP55089 124 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 OR2B6P58173 313 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 HERVK_113P63132 956 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ERVK-8P63133 956 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CDR2Q01850 454 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 GHRHRQ02643 423 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 PLA2G7Q13093 441 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ORC2Q13416 577 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 NFYCQ13952 458 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 GK3PQ14409 553 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 EXOSC7Q15024 291 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 PTPRRQ15256 657 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CYTH1Q15438 398 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 EFNB3Q15768 340 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 C2CD6Q53TS8 623 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 NT5DC1Q5TFE4 455 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 FAM69BQ5VUD6 431 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 GPR107Q5VW38 600 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 METRNLQ641Q3 311 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 OR52W1Q6IF63 320 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CLEC18BQ6UXF7 455 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 UTS2BQ765I0 119 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 MON1BQ7L1V2 547 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CD163Q86VB7 1156 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 SFTPA1Q8IWL2 248 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 KBTBD2Q8IY47 623 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 PELI3Q8N2H9 469 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF786Q8N393 782 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CLDN19Q8N6F1 224 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 THAP8Q8NA92 274 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CLEC18CQ8NCF0 446 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF248Q8NDW4 579 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 OR52N2Q8NGI0 321 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 OR6M1Q8NGM8 313 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 OR4L1Q8NH43 312 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 OR52I2Q8NH67 350 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 WDR36Q8NI36 951 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 PIH1D2Q8WWB5 315 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 FCAMRQ8WWV6 532 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 P3H4Q92791 437 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 NAT6Q93015 286 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 MYLPFQ96A32 169 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 MTBPQ96DY7 904 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 SCRN2Q96FV2 425 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 KAZALD1Q96I82 304 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 B3GALT6Q96L58 329 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 NSMCE3Q96MG7 304 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 IL4I1Q96RQ9 567 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 P2RY13Q9BPV8 354 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF251Q9BRH9 671 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 BTBD10Q9BSF8 475 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ERVK-6Q9BXR3 956 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 OSBPL1AQ9BXW6 950 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 DUSP16Q9BY84 665 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 SRRQ9GZT4 340 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 LRRN3Q9H3W5 708 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ESRP2Q9H6T0 727 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 SEBOXQ9HB31 216 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ZFP64Q9NPA5 681 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 PHPT1Q9NRX4 125 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ZFP57Q9NU63 452 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 IMP3Q9NV31 184 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CISD1Q9NZ45 108 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 CD274Q9NZQ7 290 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 ABCD2Q9UBJ2 740 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms