RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 HNF1AP20823 631 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CNR1P21554 472 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC6A2P23975 617 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 HTR2AP28223 471 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 NMBRP28336 390 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 HSD11B1P28845 292 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 VIPR1P32241 457 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 FOXN2P32314 431 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CCR2P41597 374 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC1A2P43004 574 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 RGRP47804 291 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 HCAR3P49019 387 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TGM4P49221 684 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 RGS4P49798 205 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 NDST2P52849 883 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 WDR4P57081 412 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 YBX1P67809 324 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 POU6F2P78424 691 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 ELF3P78545 371 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 NTHL1P78549 312 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SIM1P81133 766 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 TXNL4AP83876 142 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 EFNB1P98172 346 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 IL9RQ01113 521 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 RHAGQ02094 409 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 FPGSQ05932 587 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 RING1Q06587 406 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC10A7Q0GE19 358 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 LSAMPQ13449 338 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TOP3AQ13472 1001 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 VEZF1Q14119 521 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SMCO1Q147U7 214 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC1A5Q15758 541 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ANKRD55Q3KP44 614 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 COQ5Q5HYK3 327 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 WASHC2DQ5SRD0 308 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CERCAMQ5T4B2 595 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CCNJQ5T5M9 372 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ATG9BQ674R7 924 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TXNDC8Q6A555 127 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 PLAG1Q6DJT9 500 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 FIGLAQ6QHK4 219 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SHISA2Q6UWI4 295 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TMEM182Q6ZP80 229 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 IDO2Q6ZQW0 420 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 GAREM2Q75VX8 874 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SSX9Q7RTT3 188 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SMIM15Q7Z3B0 74 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 VN1R5Q7Z5H4 357 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ABHD12BQ7Z5M8 362 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 ADGRD2Q7Z7M1 963 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 LHFPL3Q86UP9 236 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TRABD2AQ86V40 505 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 GPR180Q86V85 440 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 KMT5CQ86Y97 462 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TDRPQ86YL5 185 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TMC8Q8IU68 726 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 NAGSQ8N159 534 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 PDIK1LQ8N165 341 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ARHGAP24Q8N264 748 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ATPAF2Q8N5M1 289 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SIRT6Q8N6T7 355 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 BCORP1Q8N888 145 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 PTGR2Q8N8N7 351 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 ARL14EPQ8N8R7 260 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 ATP6V0D2Q8N8Y2 350 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TMEM104Q8NE00 496 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OR7D4Q8NG98 312 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OR5T3Q8NGG3 340 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OR4A15Q8NGL6 344 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OR4C15Q8NGM1 316 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OR10S1Q8NGN2 331 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OR5M1Q8NGP8 315 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OR52N1Q8NH53 320 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 RP9Q8TA86 221 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 TBC1D15Q8TC07 691 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 HCAR2Q8TDS4 363 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 GRHL3Q8TE85 626 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SETD7Q8WTS6 366 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 PYROXD1Q8WU10 500 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 C2orf15Q8WU43 125 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 WFDC12Q8WWY7 111 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CACNG8Q8WXS5 425 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 PSMG2Q969U7 264 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 DACT3Q96B18 629 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 MTERF3Q96E29 417 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TCEAL4Q96EI5 215 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ELMOD3Q96FG2 381 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 BOD1Q96IK1 185 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 MAGEB18Q96M61 343 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ZNF512Q96ME7 567 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 ZNF778Q96MU6 729 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 RANBP9Q96S59 729 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 IL12RB2Q99665 862 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 NPAS2Q99743 824 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 DPH2Q9BQC3 489 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 C7orf50Q9BRJ6 194 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 TMEM43Q9BTV4 400 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CHRDL1Q9BU40 450 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 KATNB1Q9BVA0 655 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms