RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 OR5M10Q6IEU7 315 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 FAM45BPQ6NSW5 357 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 DNAJC14Q6Y2X3 702 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 GALNT7Q86SF2 657 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 ATG4DQ86TL0 474 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZCCHC7Q8N3Z6 543 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 RNF175Q8N4F7 328 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 SNX31Q8N9S9 440 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 ELOA3Q8NG57 546 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 FAM45AQ8TCE6 357 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 OMA1Q96E52 524 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 CMTM7Q96FZ5 175 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 C1orf159Q96HA4 380 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 DKKL1Q9UK85 242 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF175Q9Y473 711 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 ASB4Q9Y574 426 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 PKD1L1Q8TDX9 2849 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 PLPP1O14494 284 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 AQP8O94778 261 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 KRT14P02533 472 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 PCNAP12004 261 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 S1PR1P21453 382 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 GGT5P36269 586 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 HSPA7P48741 367 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 NEK2P51955 445 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 CHIT1Q13231 466 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 E2F2Q14209 437 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF460Q14592 562 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 TGFBIQ15582 683 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 NRF1Q16656 503 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 HIST2H2ACQ16777 129 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 PAGE2BQ5JRK9 111 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 TEDDM1Q5T9Z0 273 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 HIST2H2AA3Q6FI13 130 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 MRM1Q6IN84 353 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 CLEC2AQ6UVW9 174 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 FRA10AC1Q70Z53 315 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 GALNT12Q8IXK2 581 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 KBTBD8Q8NFY9 601 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 OR6K3Q8NGY3 331 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 ANKRD49Q8WVL7 239 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 RGMAQ96B86 450 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 TACO1Q9BSH4 297 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF717Q9BY31 904 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 GRIP2Q9C0E4 1043 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 OR10A4Q9H209 315 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 ALG2Q9H553 416 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 CHODLQ9H9P2 273 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 WHRNQ9P202 907 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 B3GALT5Q9Y2C3 310 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZKSCAN5Q9Y2L8 839 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 GPR52Q9Y2T5 361 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF337Q9Y3M9 751 aa9.34□□□□□ -0.91
CTDNEP1-202ENST00000570380 C17orf51A8MQB3 221 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 EFCAB8A8MWE9 144 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 PGRMC2O15173 223 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 SEC14L5O43304 696 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 TMPRSS11DO60235 418 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 EEDO75530 441 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 NR2F6P10588 404 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 PGAM1P18669 254 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 PSMB1P20618 241 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 IL11P20809 199 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 PTNP21246 168 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 NUDT6P53370 316 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 CLDN20P56880 219 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 EEFSECP57772 596 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 DSCR9P59020 149 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 IRX1P78414 480 aaPredicted RBP9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 IRF8Q02556 426 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 PLCXD2Q0VAA5 305 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 SQLEQ14534 574 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 TBCCQ15814 346 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 PDK4Q16654 411 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 FAM174BQ3ZCQ3 159 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 ADAMTSL2Q86TH1 951 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 DTX2Q86UW9 622 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 LAS2Q8IYD9 372 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 NKAPQ8N5F7 415 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 OR7G3Q8NG95 312 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 OR7G1Q8NGA0 311 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 S100PBPQ96BU1 408 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 LCORQ96JN0 433 aaPredicted RBP9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 ITPAQ9BY32 194 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 TRIM2Q9C040 744 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 MANSC1Q9H8J5 431 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 MOCS1Q9NZB8 636 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 CTNNAL1Q9UBT7 734 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 KCNS2Q9ULS6 477 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 CORO1CQ9ULV4 474 aaPredicted RBP9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 CLEC4AQ9UMR7 237 aa9.33□□□□□ -0.92
CTDNEP1-202ENST00000570380 A0A0A6YYD5 115 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 ACOX3O15254 700 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 BANF1O75531 89 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 STK16O75716 305 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 FGGP02679 453 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 ALDOAP04075 364 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 SLC25A16P16260 332 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms