RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 TRMT12Q53H54 448 aaKnown RBP12.44□□□□□ -0.42
CNOT1-215ENST00000569020 UBAP2Q5T6F2 1119 aaKnown RBP12.44□□□□□ -0.42
CNOT1-215ENST00000569020 DESI1Q6ICB0 168 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 LETMD1Q6P1Q0 360 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 SCIMPQ6UWF3 145 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 PAMR1Q6UXH9 720 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 RPS27LQ71UM5 84 aaKnown RBP12.44□□□□□ -0.42
CNOT1-215ENST00000569020 MMP21Q8N119 569 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 C1orf52Q8N6N3 182 aaKnown RBP12.44□□□□□ -0.42
CNOT1-215ENST00000569020 LINC01560Q8TB33 94 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 ZNF483Q8TF39 744 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-215ENST00000569020 ZFP3Q96NJ6 502 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 TM9SF2Q99805 663 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 YIPF4Q9BSR8 244 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 C1QTNF3Q9BXJ4 246 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 GALNT9Q9HCQ5 603 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 PFDN4Q9NQP4 134 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 EHD3Q9NZN3 535 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 JKAMPQ9P055 326 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 VPS29Q9UBQ0 182 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 ZNF180Q9UJW8 692 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 UTS2RQ9UKP6 389 aa12.44□□□□□ -0.42
CNOT1-215ENST00000569020 PRRC2AP48634 2157 aaKnown RBP12.44□□□□□ -0.42
CNOT1-215ENST00000569020 SPG11Q96JI7 2443 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 PRAMEF25A6NGN4 478 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 FRG2CA6NGY1 282 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 A8MT66 165 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 PPP6CO00743 305 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 TO15178 435 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 REM1O75628 298 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 OR4F21O95013 312 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 HSD3B1P14060 373 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 TSPAN8P19075 237 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 HSD3B2P26439 372 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 EMDP50402 254 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 MRPS35P82673 323 aaKnown RBP12.43□□□□□ -0.42
CNOT1-215ENST00000569020 SRYQ05066 204 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 CLCQ05315 142 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 DUSP2Q05923 314 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 KEAP1Q14145 624 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 LTB4RQ15722 352 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 FAM180BQ6P0A1 224 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 IFNEQ86WN2 208 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 MMGT1Q8N4V1 131 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 C9orf106Q8NAJ2 232 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 NOA1Q8NC60 698 aaKnown RBP12.43□□□□□ -0.42
CNOT1-215ENST00000569020 SIMC1Q8NDZ2 872 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 RDH11Q8TC12 318 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 MBD6Q96DN6 1003 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 CNRIP1Q96F85 164 aaPredicted RBP12.43□□□□□ -0.42
CNOT1-215ENST00000569020 POM121Q96HA1 1249 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 TUBA1CQ9BQE3 449 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 SFXN3Q9BWM7 321 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 RBM24Q9BX46 236 aaKnown RBP12.43□□□□□ -0.42
CNOT1-215ENST00000569020 OR2B2Q9GZK3 357 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 ACBD3Q9H3P7 528 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 SERHLQ9NQF3 203 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 MCM8Q9UJA3 840 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 MED12LQ86YW9 2145 aa12.43□□□□□ -0.42
CNOT1-215ENST00000569020 OR6C70A6NIJ9 312 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 TRIM49D1C9J1S8 452 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 SUPT7LO94864 414 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 RCBTB2O95199 551 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 KRT6AP02538 564 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 KRT6BP04259 564 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 PCSK2P16519 638 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 TAC1P20366 129 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 CHMP24386 653 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 SOX18P35713 384 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 KRT20P35900 424 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 SLCO1A2P46721 670 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 CPA2P48052 419 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 KRT6CP48668 564 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 FOXD4Q12950 439 aaPredicted RBP12.42□□□□□ -0.42
CNOT1-215ENST00000569020 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
CNOT1-215ENST00000569020 RASA2Q15283 850 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 ERCC6LQ2NKX8 1250 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 TEX35Q5T0J7 233 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 LGSNQ5TDP6 509 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 AAGABQ6PD74 315 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 LUZP2Q86TE4 346 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 PLCZ1Q86YW0 608 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 TRIM42Q8IWZ5 723 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 CCDC116Q8IYX3 515 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 SAMD14Q8IZD0 417 aaPredicted RBP12.42□□□□□ -0.42
CNOT1-215ENST00000569020 WDSUB1Q8N9V3 476 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 ZNF675Q8TD23 568 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 DCAKDQ8WVC6 231 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 WNT2BQ93097 391 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 TMBIM1Q969X1 311 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 ZNF681Q96N22 645 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 COL21A1Q96P44 957 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 HBEGFQ99075 208 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 FMO2Q99518 471 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 TAS2R10Q9NYW0 307 aa12.42□□□□□ -0.42
CNOT1-215ENST00000569020 GPR55Q9Y2T6 319 aaPredicted RBP12.42□□□□□ -0.42
CNOT1-215ENST00000569020 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-215ENST00000569020 CLCA1A8K7I4 914 aa12.41□□□□□ -0.42
CNOT1-215ENST00000569020 KIF2AO00139 706 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-215ENST00000569020 SBK3P0C264 359 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms