RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	PLK5	Q496M5	336 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ATAT1	Q5SQI0	421 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	LIPK	Q5VXJ0	399 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	TMEM107	Q6UX40	140 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ZNF730	Q6ZMV8	503 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	MTSS1L	Q765P7	747 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	GET4	Q7L5D6	327 aa	Predicted RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	CCDC116	Q8IYX3	515 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	NUP43	Q8NFH3	380 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ARMC5	Q96C12	935 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	RNFT2	Q96EX2	444 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	CNRIP1	Q96F85	164 aa	Predicted RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	NRTN	Q99748	197 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	C1QTNF2	Q9BXJ5	285 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ACTRT3	Q9BYD9	372 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	KLHL31	Q9H511	634 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	KIR3DX1	Q9H7L2	352 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	SYNDIG1	Q9H7V2	258 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	MED17	Q9NVC6	651 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	GPSM3	Q9Y4H4	160 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ATG4B	Q9Y4P1	393 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	PCDHGA4	Q9Y5G9	962 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	SPIN1	Q9Y657	262 aa	Predicted RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	DENND4A	Q7Z401	1863 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883		A0A1W2PP55	124 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	GLOD5	A6NK44	160 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	PRICKLE3	O43900	615 aa	Predicted RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	PAK4	O96013	591 aa	Predicted RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	KRT8	P05787	483 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	CASP3	P42574	277 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	MTNR1A	P48039	350 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	SLC9A3	P48764	834 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	MAN2A2	P49641	1150 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	RPS15A	P62244	130 aa	Known RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	SCN1B	Q07699	218 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	FUT5	Q11128	374 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	HYAL2	Q12891	473 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	TPBG	Q13641	420 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ENPP2	Q13822	863 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	DDI2	Q5TDH0	399 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	AGAP6	Q5VW22	663 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ACSM5	Q6NUN0	579 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	GANC	Q8TET4	914 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	UCN3	Q969E3	161 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	GAL3ST3	Q96A11	431 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ELP4	Q96EB1	424 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	AGAP4	Q96P64	663 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	WFDC6	Q9BQY6	131 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	YIPF4	Q9BSR8	244 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	SAP130	Q9H0E3	1048 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	TXNL4B	Q9NX01	149 aa	Known RBP	11.91	□□□□□ -0.5
PKM-222	ENST00000568883	ERVK13-1	Q9NX77	482 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	OR6C2	Q9NZP2	312 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	MOSPD1	Q9UJG1	213 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	CES1P1	Q9UKY3	287 aa		11.91	□□□□□ -0.5
PKM-222	ENST00000568883	LRRK1	Q38SD2	2015 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883		A0A087WUU8	490 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	PRR19	A6NJB7	356 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	KDM4E	B2RXH2	506 aa	Predicted RBP	11.9	□□□□□ -0.5
PKM-222	ENST00000568883	PGRMC2	O15173	223 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	PPM1D	O15297	605 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	PROM1	O43490	865 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	CDRT1	O95170	752 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	CEACAM5	P06731	702 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	FPR3	P25089	353 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	GABRA5	P31644	462 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	RPE65	Q16518	533 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	DECR1	Q16698	335 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	XKRX	Q6PP77	449 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	COMTD1	Q86VU5	262 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	CACUL1	Q86Y37	369 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	ANKK1	Q8NFD2	765 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	GPR151	Q8TDV0	419 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	ADAMTS15	Q8TE58	950 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.9	□□□□□ -0.5
PKM-222	ENST00000568883	SLC22A18	Q96BI1	424 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	TMEM106C	Q9BVX2	250 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	BARHL1	Q9BZE3	327 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	AICDA	Q9GZX7	198 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	SLC38A1	Q9H2H9	487 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	DZANK1	Q9NVP4	752 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	PHF11	Q9UIL8	331 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	ZNF232	Q9UNY5	417 aa		11.9	□□□□□ -0.5
PKM-222	ENST00000568883	CAB39	Q9Y376	341 aa	Predicted RBP	11.9	□□□□□ -0.5
PKM-222	ENST00000568883	HTR3E	A5X5Y0	456 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	PRKRA	O75569	313 aa	Known RBP	11.89	□□□□□ -0.51
PKM-222	ENST00000568883	OR5F1	O95221	314 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	EPPIN	O95925	133 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	ASGR2	P07307	311 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	SPN	P16150	400 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	FCAR	P24071	287 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	CERS1	P27544	350 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	ETV5	P41161	510 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	MC3R	P41968	323 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	ETV1	P50549	477 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	RGS8	P57771	180 aa	Predicted RBP	11.89	□□□□□ -0.51
PKM-222	ENST00000568883	OR2B6	P58173	313 aa		11.89	□□□□□ -0.51
PKM-222	ENST00000568883	GPM6B	Q13491	265 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms