RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 TMEM64Q6YI46 380 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 B3GNT6Q6ZMB0 384 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 R3HCC1LQ7Z5L2 792 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 NUDCD3Q8IVD9 361 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 PM20D2Q8IYS1 436 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 KIRREL3Q8IZU9 778 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 MREGQ8N565 214 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ZNF441Q8N8Z8 693 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 OR5M9Q8NGP3 310 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 OR9A2Q8NGT5 310 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 LRRC46Q96FV0 321 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 TMEM41AQ96HV5 264 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 PPP3R2Q96LZ3 170 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 COL21A1Q96P44 957 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ANGPTL4Q9BY76 406 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 C12orf65Q9H3J6 166 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 SH2D2AQ9NP31 389 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ACKR4Q9NPB9 350 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 DDX18Q9NVP1 670 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 TAS2R7Q9NYW3 318 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 SH3BP4Q9P0V3 963 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ZNF639Q9UID6 485 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 CNOT11Q9UKZ1 510 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 TRAF6Q9Y4K3 522 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 NCKAP5O14513 1909 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 CACNA1CQ13936 2221 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 UTP20O75691 2785 aaKnown RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 A0A087WV62 115 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 OR6C70A6NIJ9 312 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 TTC36A6NLP5 189 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 MYO1GB0I1T2 1018 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 PDPK1O15530 556 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 ERLIN1O75477 346 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 SNUPNO95149 360 aaKnown RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 LRATO95237 230 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 CBX7O95931 251 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 LINC00032P0C843 101 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 PRPH2P23942 346 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 EMDP50402 254 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 MANFP55145 182 aaKnown RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 RPL38P63173 70 aaKnown RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 ADORA2A-AS1P86434 159 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 MGAT2Q10469 447 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 PMPCAQ10713 525 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 ZNF155Q12901 538 aaPredicted RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 MAD2L1Q13257 205 aaPredicted RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 CEBPEQ15744 281 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 VPS26BQ4G0F5 336 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 ATP6AP1LQ52LC2 224 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 ARL13AQ5H913 290 aaPredicted RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 FAM71E1Q6IPT2 247 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 LRIG3Q6UXM1 1119 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 RNF165Q6ZSG1 346 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 SLC44A2Q8IWA5 706 aaPredicted RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 CEP70Q8NHQ1 597 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 NEIL3Q8TAT5 605 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 TWIST2Q8WVJ9 160 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 PPCDCQ96CD2 204 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 ZBED6CLQ96FA7 236 aaPredicted RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 DMRTA2Q96SC8 542 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 PRPF18Q99633 342 aaKnown RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 TMEM109Q9BVC6 243 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 OSBPL11Q9BXB4 747 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 ZNF703Q9H7S9 590 aaPredicted RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 HHATLQ9HCP6 504 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 Q9N2J8 555 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 KCNK9Q9NPC2 374 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 KCNJ16Q9NPI9 418 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 SDHAF3Q9NRP4 125 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 PNPLA3Q9NST1 481 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 SLC17A7Q9P2U7 560 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 GPR55Q9Y2T6 319 aaPredicted RBP9.51□□□□□ -0.89
UBR1-207ENST00000568782 PCDHGB3Q9Y5G1 929 aa9.51□□□□□ -0.89
UBR1-207ENST00000568782 DOPEY1Q5JWR5 2465 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 PRAMEF25A6NGN4 478 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 AHRRA9YTQ3 701 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 GNB5O14775 395 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 TO15178 435 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 TM9SF1O15321 606 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 ICOSLGO75144 302 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 TRIM3O75382 744 aaPredicted RBP9.5□□□□□ -0.89
UBR1-207ENST00000568782 CBR3O75828 277 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 HSPA4LO95757 839 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 HPCAL1P37235 193 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 ZFP36L2P47974 494 aaKnown RBP9.5□□□□□ -0.89
UBR1-207ENST00000568782 TRPC1P48995 793 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 PNLIPRP2P54317 469 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 DUSP8Q13202 625 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 DECR1Q16698 335 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 CYP27C1Q4G0S4 372 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 CEP85LQ5SZL2 805 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 KANK2Q63ZY3 851 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 TMEM81Q6P7N7 255 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 ENPP6Q6UWR7 440 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 TMEM107Q6UX40 140 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 ANGPTL8Q6UXH0 198 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 LARP4Q71RC2 724 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBR1-207ENST00000568782 SZRD1Q7Z422 152 aa9.5□□□□□ -0.89
UBR1-207ENST00000568782 FGD2Q7Z6J4 655 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms