RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 DTWD2Q8NBA8 298 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 OR6C4Q8NGE1 309 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 OR52R1Q8NGF1 315 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 OR1L3Q8NH93 324 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 GIPC3Q8TF64 312 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 FEVQ99581 238 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 DPYSL5Q9BPU6 564 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 RSPO3Q9BXY4 272 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 ADNPQ9H2P0 1102 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 EPB41L1Q9H4G0 881 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 CACYBPQ9HB71 228 aaKnown RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 FGF21Q9NSA1 209 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 USE1Q9NZ43 259 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 TMEFF2Q9UIK5 374 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 SERTAD3Q9UJW9 196 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 LIPT1Q9Y234 373 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 WDR45Q9Y484 360 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 GPC6Q9Y625 555 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 A0A0G2JPF8 293 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 HNRNPCL2B2RXH8 293 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 HNRNPCL3B7ZW38 293 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 PCDH17O14917 1159 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 CTNSO60931 367 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 CLPTM1O96005 669 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ALOX5P09917 674 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 SLC35E2P0CK97 266 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 HNRNPCL4P0DMR1 293 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 IL7RP16871 459 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 RHCEP18577 417 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 GABRA3P34903 492 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 CDH15P55291 814 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ZNF155Q12901 538 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 PIN1Q13526 163 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 ZNF267Q14586 743 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 RNF220Q5VTB9 566 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 NIPAL1Q6NVV3 410 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 FIGNL1Q6PIW4 674 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 C8orf59Q8N0T1 100 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 METTL25Q8N6Q8 603 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 PIK3C3Q8NEB9 887 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 OR10G2Q8NGC3 310 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 OR9Q2Q8NGE9 314 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 MIPOL1Q8TD10 442 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 PTCHD1Q96NR3 888 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 DGAT2Q96PD7 388 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 MBOAT4Q96T53 435 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 EPYCQ99645 322 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 SLC38A1Q9H2H9 487 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 PRDM9Q9NQV7 894 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 THSD1Q9NS62 852 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 RLIMQ9NVW2 624 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 GIN1Q9NXP7 522 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 C19orf53Q9UNZ5 99 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 SLC9A8Q9Y2E8 581 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 H0YAE9 185 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 TGFBR3LH3BV60 316 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 HRKO00198 91 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ZNF749O43361 778 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ASNA1O43681 348 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ACP2P11117 423 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ETS2P15036 469 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 CDH2P19022 906 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 EEF1B2P24534 225 aaKnown RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 ELK4P28324 431 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 SSTR4P31391 388 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 SOX18P35713 384 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 MAN2A2P49641 1150 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 CCL7P80098 99 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 IL5RAQ01344 420 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 NNATQ16517 81 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 RFX4Q33E94 735 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 TCTN3Q6NUS6 607 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 TMEM71Q6P5X7 295 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 TMPRSS9Q7Z410 1059 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 COMTD1Q86VU5 262 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ZNF595Q8IYB9 648 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 D2HGDHQ8N465 521 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 SLC5A8Q8N695 610 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ZNF614Q8N883 585 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 TSPAN14Q8NG11 270 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 OR4D11Q8NGI4 311 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 OR52P1PQ8NH57 321 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 GTPBP3Q969Y2 492 aaKnown RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 NRBF2Q96F24 287 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ZNF285Q96NJ3 590 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 RDH12Q96NR8 316 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 TRNT1Q96Q11 434 aaKnown RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 ALPK1Q96QP1 1244 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 PRR14Q9BWN1 585 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 GRIP2Q9C0E4 1043 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 NMNAT1Q9HAN9 279 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 CLK4Q9HAZ1 481 aaKnown RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 FANCEQ9HB96 536 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 BCL2L10Q9HD36 194 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ACER3Q9NUN7 267 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 CALML5Q9NZT1 146 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 NPIPA5A0A0B4J1W7 369 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 CLDN24A6NM45 220 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 A8MUA0 341 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms