RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 IL18R1Q13478 541 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 GRM7Q14831 915 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 LASP1Q14847 261 aaKnown RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 GPR19Q15760 415 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 CDC73Q6P1J9 531 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 TBPL2Q6SJ96 375 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 FAM92BQ6ZTR7 304 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 USP51Q70EK9 711 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 PRICKLE2Q7Z3G6 844 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 PRSS42Q7Z5A4 293 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 SLC35F3Q8IY50 421 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 OR2L13Q8N349 312 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 SLC25A45Q8N413 288 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF555Q8NEP9 628 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 XAGE5Q8WWM1 108 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 CYGBQ8WWM9 190 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 NCSTNQ92542 709 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 MVB12AQ96EY5 273 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 TRNT1Q96Q11 434 aaKnown RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF300Q96RE9 604 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 CSF3RQ99062 836 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 TREX2Q9BQ50 279 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 SOHLH2Q9NX45 425 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 UBAP1Q9NZ09 502 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 NDUFAF4Q9P032 175 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 IL17BQ9UHF5 180 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 CLCA2Q9UQC9 943 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 GPC6Q9Y625 555 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 ENPP4Q9Y6X5 453 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 TEP1Q99973 2627 aaKnown RBP13.67□□□□□ -0.22
COMMD4-221ENST00000567935 A0A1B0GTQ1 180 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 HYKKA2RU49 373 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF860A6NHJ4 632 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 A6NHS1 94 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 WASHC1A8K0Z3 465 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 CASC3O15234 703 aaKnown RBP13.67□□□□□ -0.22
COMMD4-221ENST00000567935 TOX3O15405 576 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-221ENST00000567935 PRKAG1P54619 331 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 DUSP2Q05923 314 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 SQSTM1Q13501 440 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 RTP5Q14D33 572 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 FAM214AQ32MH5 1076 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 KCTD21Q4G0X4 260 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF628Q5EBL2 1059 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 YOD1Q5VVQ6 348 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-221ENST00000567935 WDR74Q6RFH5 385 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-221ENST00000567935 CYP4Z1Q86W10 505 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF595Q8IYB9 648 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 OR10Q1Q8NGQ4 319 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 NR4A3Q92570 626 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 TTC9Q92623 222 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 FGF11Q92914 225 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 RAB8BQ92930 207 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF354BQ96LW1 612 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 OR7D2Q96RA2 312 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 PELOQ9BRX2 385 aaKnown RBP13.67□□□□□ -0.22
COMMD4-221ENST00000567935 GIN1Q9NXP7 522 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 SEC14L3Q9UDX4 400 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 C19orf53Q9UNZ5 99 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-221ENST00000567935 MYRFQ9Y2G1 1151 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 KNTC1P50748 2209 aa13.67□□□□□ -0.22
COMMD4-221ENST00000567935 NBPF19A0A087WUL8 3843 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 IGHV5-51A0A0C4DH38 117 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 ARRDC5A6NEK1 342 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 SGK494L7N484 410 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 CLDN4O14493 209 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 CHST10O43529 356 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 HS6ST1O60243 411 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 COQ9O75208 318 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 RDH16O75452 317 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 SMNDC1O75940 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
COMMD4-221ENST00000567935 H6PDO95479 791 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 SNAP29O95721 258 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 AK1P00568 194 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 OPN1SWP03999 348 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 SLC35E2P0CK97 266 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 GIMD1P0DJR0 217 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 ITGAMP11215 1152 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 CD247P20963 164 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 IGFBP5P24593 272 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 ALDH4A1P30038 563 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 XCR1P46094 333 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 KCNJ5P48544 419 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 MAN2A2P49641 1150 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 ARL4DP49703 201 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 HMGA2P52926 109 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 IST1P53990 364 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 GFERP55789 205 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 SMIM11AP58511 58 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 HSD11B2P80365 405 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 HPCAP84074 193 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 MYBPC1Q00872 1141 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 BNIP3Q12983 259 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 SHBQ15464 509 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 DEFB110Q30KQ9 67 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF750Q32MQ0 723 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 ARHGAP40Q5TG30 622 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 MFSD12Q6NUT3 480 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 MED25Q71SY5 747 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms