RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SMIM23A6NLE4 172 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 FOXO6A8MYZ6 492 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 C19orf84I3L1E1 186 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 COPEO14579 308 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 TO15178 435 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 CRCPO75575 148 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 RSL1D1O76021 490 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 SLITRK5O94991 958 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 HPNP05981 417 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 ABCB1P08183 1280 aaPredicted RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 SNRPB2P08579 225 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 ANXA4P09525 319 aaPredicted RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 CT45A8P0DMV1 189 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 CT45A9P0DMV2 189 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 GLI4P10075 376 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 CPA3P15088 417 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 CHN1P15882 459 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 PCSK2P16519 638 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 IGFBP2P18065 325 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 KRT4P19013 534 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 DDCP20711 480 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 DRD5P21918 477 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 ELAVL4P26378 380 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 MSX1P28360 303 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SSTR2P30874 369 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SOX18P35713 384 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 CASP3P42574 277 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 KIR3DL1P43629 444 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 PPICP45877 212 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 ZFP36L2P47974 494 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 MASP1P48740 699 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 EMDP50402 254 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 CDK9P50750 372 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 FOXA1P55317 472 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 MRPS35P82673 323 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 SLC18A2Q05940 514 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 BTKQ06187 659 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 TFF3Q07654 80 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 PLCXD2Q0VAA5 305 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 DUSP8Q13202 625 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SF3B4Q15427 424 aaKnown RBP eCLIP4.38□□□□□ -1.716e-6■□□□□ 11
CLK3-219ENST00000567805 LTB4RQ15722 352 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 CEBPEQ15744 281 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 NNATQ16517 81 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 ERCC6LQ2NKX8 1250 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 TRMT12Q53H54 448 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 CT45A2Q5DJT8 189 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 NHSL2Q5HYW2 709 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 C1orf185Q5T7R7 199 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 RIPPLY2Q5TAB7 128 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 FNDC7Q5VTL7 733 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 FAM219BQ5XKK7 198 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 BICRALQ6AI39 1079 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 TIGD3Q6B0B8 471 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 RTL6Q6ICC9 239 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SLC30A6Q6NXT4 461 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 FAM180BQ6P0A1 224 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 FAM111BQ6SJ93 734 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SCIMPQ6UWF3 145 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 TMEM64Q6YI46 380 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 RNF165Q6ZSG1 346 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 IKBIPQ70UQ0 350 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 NUP54Q7Z3B4 507 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SRRM1Q8IYB3 904 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 PM20D2Q8IYS1 436 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 CCDC116Q8IYX3 515 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 PRR22Q8IZ63 422 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 RIBC1Q8N443 379 aaPredicted RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 CCDC63Q8NA47 563 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 PLPP7Q8NBV4 271 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SIMC1Q8NDZ2 872 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 OR10Q1Q8NGQ4 319 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 OR1J4Q8NGS1 313 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 OR9A2Q8NGT5 310 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.38□□□□□ -1.71
CLK3-219ENST00000567805 HGDQ93099 445 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 EXOSC8Q96B26 276 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 NTNG2Q96CW9 530 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 OMA1Q96E52 524 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 C14orf79Q96F83 325 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 APOPT1Q96IL0 206 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 DOCK7Q96N67 2140 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 COL21A1Q96P44 957 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 GNRHR2Q96P88 292 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 BTBD9Q96Q07 612 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 BBS4Q96RK4 519 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 TREX2Q9BQ50 279 aaPredicted RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 TRMOQ9BU70 441 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 EBPLQ9BY08 206 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 ENKD1Q9H0I2 346 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 STMN4Q9H169 189 aaPredicted RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 SLC6A15Q9H2J7 730 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 UBQLN3Q9H347 655 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 METTL7AQ9H8H3 244 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 ANKZF1Q9H8Y5 726 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 KCNJ16Q9NPI9 418 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 RRAGDQ9NQL2 400 aaPredicted RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 SLC35C2Q9NQQ7 365 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 MKS1Q9NXB0 559 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 TAS2R9Q9NYW1 312 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms