RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 OMA1Q96E52 524 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 METTL2AQ96IZ6 378 aaKnown RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF597Q96LX8 424 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 GNRHR2Q96P88 292 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 BBS4Q96RK4 519 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 TTYH2Q9BSA4 534 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 EBPLQ9BY08 206 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 SHCBP1LQ9BZQ2 653 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 ROPN1BQ9BZX4 212 aaPredicted RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 IQCGQ9H095 443 aaKnown RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF703Q9H7S9 590 aaPredicted RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 ROPN1Q9HAT0 212 aaPredicted RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 ALKBH4Q9NXW9 302 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 TAS2R7Q9NYW3 318 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 MID2Q9UJV3 735 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 RNF6Q9Y252 685 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 DTX4Q9Y2E6 619 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 GPR55Q9Y2T6 319 aaPredicted RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 PLLPQ9Y342 182 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 KIAA1549Q9HCM3 1950 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 ANKRD17O75179 2603 aaKnown RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 CCDC168Q8NDH2 2452 aa6.34□□□□□ -1.4
SF3B3-209ENST00000567635 POLQO75417 2590 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 MED13LQ71F56 2210 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 NBPF19A0A087WUL8 3843 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 FRG2CA6NGY1 282 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 AHRRA9YTQ3 701 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 MYO1GB0I1T2 1018 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 C19orf84I3L1E1 186 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 SLC28A1O00337 649 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 AZIN1O14977 448 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TO15178 435 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 RGS14O43566 566 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 PLOD3O60568 738 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 ICOSLGO75144 302 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 CHEK2O96017 543 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 NUDT17P0C025 328 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 GLI4P10075 376 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 GABRA1P14867 456 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 DDCP20711 480 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 GDF1P27539 372 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 MASP1P48740 699 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 CDK9P50750 372 aaKnown RBP6.33□□□□□ -1.4
SF3B3-209ENST00000567635 GTF2A1P52655 376 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-209ENST00000567635 MRPS35P82673 323 aaKnown RBP6.33□□□□□ -1.4
SF3B3-209ENST00000567635 IFFO1Q0D2I5 559 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 PLCXD2Q0VAA5 305 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 SNTA1Q13424 505 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TOMM20Q15388 145 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 CEBPEQ15744 281 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 NNATQ16517 81 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 ZNF628Q5EBL2 1059 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 FNDC7Q5VTL7 733 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TIGD3Q6B0B8 471 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 CLEC6AQ6EIG7 209 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 RTL6Q6ICC9 239 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 FAM71E1Q6IPT2 247 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 NOXRED1Q6NXP6 359 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 SLC30A6Q6NXT4 461 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TMEM81Q6P7N7 255 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 B3GNT6Q6ZMB0 384 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TRABD2AQ86V40 505 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 CCDC71Q8IV32 467 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-209ENST00000567635 C10orf107Q8IVU9 208 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 FAM9CQ8IZT9 166 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 RIBC1Q8N443 379 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-209ENST00000567635 LIX1Q8N485 282 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 RPRMLQ8N4K4 120 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 OR1J4Q8NGS1 313 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 OR2W6PQ8NHA6 318 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 CDC26Q8NHZ8 85 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.33□□□□□ -1.4
SF3B3-209ENST00000567635 HGDQ93099 445 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TMBIM1Q969X1 311 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 NTNG2Q96CW9 530 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TMEM41AQ96HV5 264 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 COL21A1Q96P44 957 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 SPOCK3Q9BQ16 436 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TRMOQ9BU70 441 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 GATA5Q9BWX5 397 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-209ENST00000567635 ITPAQ9BY32 194 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 UCK2Q9BZX2 261 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 STMN4Q9H169 189 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-209ENST00000567635 SLC6A15Q9H2J7 730 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 RASSF4Q9H2L5 321 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 METTL7AQ9H8H3 244 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 ANKRA2Q9H9E1 313 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TNFRSF12AQ9NP84 129 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 MYNNQ9NPC7 610 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 KCNJ16Q9NPI9 418 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 MIEF1Q9NQG6 463 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 ZNF446Q9NWS9 450 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 C1orf109Q9NX04 203 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 MKS1Q9NXB0 559 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 FAM53CQ9NYF3 392 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TAS2R9Q9NYW1 312 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 SPRR3Q9UBC9 169 aa6.33□□□□□ -1.4
SF3B3-209ENST00000567635 TNFRSF10DQ9UBN6 386 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms