RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 POC1B-GALNT4F8VUJ3 575 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 RCBTB2O95199 551 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 SBK3P0C264 359 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 TMIGD3P0DMS9 266 aaPredicted RBP13.65□□□□□ -0.22
RNF40-209ENST00000566703 TAC1P20366 129 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 CHMP24386 653 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 CSTF3Q12996 717 aaKnown RBP13.65□□□□□ -0.22
RNF40-209ENST00000566703 EXOSC7Q15024 291 aaKnown RBP13.65□□□□□ -0.22
RNF40-209ENST00000566703 RASA2Q15283 850 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 TIFABQ6ZNK6 161 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 ADGRE4PQ86SQ3 457 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 LCA5Q86VQ0 697 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 C17orf53Q8N3J3 647 aaPredicted RBP13.65□□□□□ -0.22
RNF40-209ENST00000566703 C1orf52Q8N6N3 182 aaKnown RBP13.65□□□□□ -0.22
RNF40-209ENST00000566703 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
RNF40-209ENST00000566703 WDSUB1Q8N9V3 476 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 ADCY4Q8NFM4 1077 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 DCAKDQ8WVC6 231 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 WNT2BQ93097 391 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 SLC35A4Q96G79 324 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 COL21A1Q96P44 957 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 ALPK1Q96QP1 1244 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 SFXN3Q9BWM7 321 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 SHCBP1LQ9BZQ2 653 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 LIME1Q9H400 295 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 KLRF1Q9NZS2 232 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 DMGDHQ9UI17 866 aaKnown RBP13.65□□□□□ -0.22
RNF40-209ENST00000566703 ZNF225Q9UK10 706 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 UTS2RQ9UKP6 389 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
RNF40-209ENST00000566703 A0A087WUV0 522 aaPredicted RBP13.64□□□□□ -0.23
RNF40-209ENST00000566703 PRAMEF25A6NGN4 478 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 MANBAO00462 879 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 REM1O75628 298 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 URI1O94763 535 aaPredicted RBP13.64□□□□□ -0.23
RNF40-209ENST00000566703 OR4F21O95013 312 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 PCSK2P16519 638 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 KLK2P20151 261 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 TACR1P25103 407 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 ALDH9A1P49189 494 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 GAB1Q13480 694 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 EFR3AQ14156 821 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 NNATQ16517 81 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
RNF40-209ENST00000566703 DCST1Q5T197 706 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 DESI1Q6ICB0 168 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 RPS27LQ71UM5 84 aaKnown RBP13.64□□□□□ -0.23
RNF40-209ENST00000566703 PLCZ1Q86YW0 608 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 TRIM42Q8IWZ5 723 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 CCDC116Q8IYX3 515 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 MMP21Q8N119 569 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 CNPY4Q8N129 248 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 C9orf106Q8NAJ2 232 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 OR14L1PQ8NHC6 308 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 MTBPQ96DY7 904 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 BTBD9Q96Q07 612 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 ZNF382Q96SR6 550 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 ACBD3Q9H3P7 528 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 GALNT9Q9HCQ5 603 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 SERHLQ9NQF3 203 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 STK38LQ9Y2H1 464 aa13.64□□□□□ -0.23
RNF40-209ENST00000566703 ANKRD17O75179 2603 aaKnown RBP13.63□□□□□ -0.23
RNF40-209ENST00000566703 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 ULK1O75385 1050 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 ERN1O75460 977 aaKnown RBP13.63□□□□□ -0.23
RNF40-209ENST00000566703 SUPT7LO94864 414 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 ESRRBO95718 433 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 CT45A8P0DMV1 189 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 CT45A9P0DMV2 189 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 FOSL1P15407 271 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 TSPAN8P19075 237 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 IMPDH1P20839 514 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 SRD5A2P31213 254 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 GSTM5P46439 218 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 DGKQP52824 942 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 GFRA1P56159 465 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 MRPS22P82650 360 aaKnown RBP13.63□□□□□ -0.23
RNF40-209ENST00000566703 DUSP2Q05923 314 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 HEPACAMQ14CZ8 416 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 CEBPEQ15744 281 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 BCL2A1Q16548 175 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 UNC50Q53HI1 259 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 CT45A2Q5DJT8 189 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 ZNF628Q5EBL2 1059 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 ZNF678Q5SXM1 525 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 AAGABQ6PD74 315 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 PAMR1Q6UXH9 720 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 CDYL2Q8N8U2 506 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 SIMC1Q8NDZ2 872 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 IFT81Q8WYA0 676 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 TMBIM1Q969X1 311 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 DACH2Q96NX9 599 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 TUBA1CQ9BQE3 449 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 STMN4Q9H169 189 aaPredicted RBP13.63□□□□□ -0.23
RNF40-209ENST00000566703 PIGMQ9H3S5 423 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 SIRT5Q9NXA8 310 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 TAS2R10Q9NYW0 307 aa13.63□□□□□ -0.23
RNF40-209ENST00000566703 EHD3Q9NZN3 535 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms