RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TSPEARQ8WU66 669 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 PSMF1Q92530 271 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 JADE3Q92613 823 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 GTF2H4Q92759 462 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 SLC35G5Q96KT7 338 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 VSTM2LQ96N03 204 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 AGAP4Q96P64 663 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 LRRC37BQ96QE4 947 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 SLC35A5Q9BS91 424 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 CCDC106Q9BWC9 280 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 TRIM4Q9C037 500 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 FOLH1BQ9HBA9 442 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 SLC52A3Q9NQ40 469 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 ABI3Q9P2A4 366 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 NDUFAF1Q9Y375 327 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 PCDHGA9Q9Y5G4 932 aaKnown RBP10.63□□□□□ -0.71
KARS-207ENST00000566560 CACNA1BQ00975 2339 aa10.63□□□□□ -0.71
KARS-207ENST00000566560 TNRC6AQ8NDV7 1962 aaKnown RBP10.63□□□□□ -0.71
KARS-207ENST00000566560 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 A0A096LPI6 279 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 BBIP1A8MTZ0 92 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 WWP2O00308 870 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 MAN1A2O60476 641 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 ERN1O75460 977 aaKnown RBP10.62□□□□□ -0.71
KARS-207ENST00000566560 ITGA10O75578 1167 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 GSNP06396 782 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 TRPC1P48995 793 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 PRIM2P49643 509 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 CYLC2Q14093 348 aaPredicted RBP10.62□□□□□ -0.71
KARS-207ENST00000566560 ELOAQ14241 798 aaKnown RBP10.62□□□□□ -0.71
KARS-207ENST00000566560 LASP1Q14847 261 aaKnown RBP10.62□□□□□ -0.71
KARS-207ENST00000566560 TLR1Q15399 786 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 ZNHIT3Q15649 155 aaPredicted RBP10.62□□□□□ -0.71
KARS-207ENST00000566560 MEP1AQ16819 746 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 MMEL1Q495T6 779 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 GTDC1Q4AE62 458 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 PAGE3Q5JUK9 113 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 REP15Q6BDI9 236 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 MFSD12Q6NUT3 480 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 H3F3CQ6NXT2 135 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 ISLR2Q6UXK2 745 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 LINC00696Q6ZRV3 163 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 ZNF621Q6ZSS3 439 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 DHDDSQ86SQ9 333 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 RPS19BP1Q86WX3 136 aaKnown RBP10.62□□□□□ -0.71
KARS-207ENST00000566560 TREML1Q86YW5 311 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 BEST3Q8N1M1 668 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 POU5F2Q8N7G0 328 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 ZNF441Q8N8Z8 693 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 SLC22A8Q8TCC7 542 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 GIMAP5Q96F15 307 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 ZNF354BQ96LW1 612 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 NPAS2Q99743 824 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 CDCP1Q9H5V8 836 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 EPS8L2Q9H6S3 715 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 ZNF552Q9H707 407 aaPredicted RBP10.62□□□□□ -0.71
KARS-207ENST00000566560 LIN28AQ9H9Z2 209 aaKnown RBP10.62□□□□□ -0.71
KARS-207ENST00000566560 SLC6A13Q9NSD5 602 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 NTMQ9P121 344 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 MYOTQ9UBF9 498 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 ERVK-11Q9UQG0 969 aa10.62□□□□□ -0.71
KARS-207ENST00000566560 LOC100653049A0A140TA62 436 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 FRG2CA6NGY1 282 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 TMEM200CA6NKL6 621 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 MRASO14807 208 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 OR2J2O76002 312 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 KRT34O76011 436 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 KCNH1O95259 989 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 HMGN2P05204 90 aaKnown RBP10.61□□□□□ -0.71
KARS-207ENST00000566560 KRT16P08779 473 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 FAM87AP0C7U9 286 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 COX4I1P13073 169 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 CASRP41180 1078 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 NR0B1P51843 470 aaKnown RBP10.61□□□□□ -0.71
KARS-207ENST00000566560 CORO7P57737 925 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 MLF1P58340 268 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 DCAF7P61962 342 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 RPS26P62854 115 aaKnown RBP10.61□□□□□ -0.71
KARS-207ENST00000566560 KCNAB2Q13303 367 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 MFAP5Q13361 173 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 NFYCQ13952 458 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 COQ5Q5HYK3 327 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 ACER2Q5QJU3 275 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 LRIF1Q5T3J3 769 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 SAXO2Q658L1 398 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 NPSR1Q6W5P4 371 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 C16orf47Q6ZP98 133 aaPredicted RBP10.61□□□□□ -0.71
KARS-207ENST00000566560 WDR53Q7Z5U6 358 aaPredicted RBP10.61□□□□□ -0.71
KARS-207ENST00000566560 TAGAPQ8N103 731 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 ARMC10Q8N2F6 343 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 DPP10Q8N608 796 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 CDRT4Q8N9R6 151 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 C17orf47Q8NEP4 570 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 RP9Q8TA86 221 aaKnown RBP10.61□□□□□ -0.71
KARS-207ENST00000566560 TTC9Q92623 222 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 ADIPOR1Q96A54 375 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 NEURL3Q96EH8 262 aa10.61□□□□□ -0.71
KARS-207ENST00000566560 OTUB1Q96FW1 271 aaPredicted RBP10.61□□□□□ -0.71
KARS-207ENST00000566560 AURKBQ96GD4 344 aaPredicted RBP10.61□□□□□ -0.71
KARS-207ENST00000566560 LCORQ96JN0 433 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms