RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 A0A1W2PP18 115 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 DYTNA2CJ06 578 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 FRG2CA6NGY1 282 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 CCDC154A6NI56 674 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 A8MUI8 341 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 FXYD1O00168 92 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 RFXANKO14593 260 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 TO15178 435 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 EMC8O43402 210 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 ERN1O75460 977 aaKnown RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 BCAS2O75934 225 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 OR6B1O95007 311 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 WDPCPO95876 746 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 F10P00742 488 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 ALPPP05187 535 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 HMGN2P05204 90 aaKnown RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 GSNP06396 782 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 FBXO45P0C2W1 286 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 ZCCHC18P0CG32 403 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 UQCRC2P22695 453 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 ADSLP30566 484 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 TRHRP34981 398 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 SOX3P41225 446 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 CCT3P49368 545 aaKnown RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 PRR5P85299 388 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 LRRC74AQ0VAA2 488 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 TP53BP2Q13625 1128 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 TUBA3CQ13748 450 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 LY6DQ14210 128 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 LASP1Q14847 261 aaKnown RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 MAPKAPK3Q16644 382 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 DUSP5Q16690 384 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 MEP1AQ16819 746 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 PIGGQ5H8A4 983 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 ABHD17BQ5VST6 288 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 IRAK1BP1Q5VVH5 260 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 TUBA3EQ6PEY2 450 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 DLEU7Q6UYE1 221 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 SZRD1Q7Z422 152 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 SNX32Q86XE0 403 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 DPP10Q8N608 796 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 RBMXL3Q8N7X1 1067 aaKnown RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 ANKS4BQ8N8V4 417 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 MDS2Q8NDY4 140 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 NUP43Q8NFH3 380 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 OR56A1Q8NGH5 318 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 C9orf43Q8TAL5 461 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 TSPEARQ8WU66 669 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 NEURL3Q96EH8 262 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 OTUB1Q96FW1 271 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 AURKBQ96GD4 344 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 C16orf58Q96GQ5 468 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 BBC3Q96PG8 261 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 PANX1Q96RD7 426 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 SLC35A5Q9BS91 424 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 TRIM45Q9H8W5 580 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 MRGBPQ9NV56 204 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 SLAMF8Q9P0V8 285 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 PRODH2Q9UF12 536 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 CFL2Q9Y281 166 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 GPR55Q9Y2T6 319 aaPredicted RBP7.54□□□□□ -1.2
CDH13-208ENST00000566333 PCDHGB7Q9Y5F8 929 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 SNX8Q9Y5X2 465 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 MYO18BQ8IUG5 2567 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 FLNCQ14315 2725 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 GXYLT2A0PJZ3 443 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 OR5H15A6NDH6 313 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 ADAM10O14672 748 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 ACOX3O15254 700 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 CCDC22O60826 627 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 NEURL1O76050 574 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 NKX2-2O95096 273 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 CPSF4O95639 269 aaKnown RBP7.53□□□□□ -1.2
CDH13-208ENST00000566333 SNRPB2P08579 225 aaKnown RBP7.53□□□□□ -1.2
CDH13-208ENST00000566333 DRD5P21918 477 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 ABCD3P28288 659 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 PPICP45877 212 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 TRPC1P48995 793 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 SSR4P51571 173 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 NR0B1P51843 470 aaKnown RBP7.53□□□□□ -1.2
CDH13-208ENST00000566333 PRKAG1P54619 331 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 FUT5Q11128 374 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 ZNF791Q3KP31 576 aaPredicted RBP7.53□□□□□ -1.2
CDH13-208ENST00000566333 SPDYE7PQ495Y7 208 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 LACTB2Q53H82 288 aaPredicted RBP7.53□□□□□ -1.2
CDH13-208ENST00000566333 COQ5Q5HYK3 327 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 COX20Q5RI15 118 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 C6orf10Q5SRN2 563 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 GKAP1Q5VSY0 366 aaPredicted RBP7.53□□□□□ -1.2
CDH13-208ENST00000566333 FAM91A1Q658Y4 838 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 REP15Q6BDI9 236 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 CDC73Q6P1J9 531 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 ZGRF1Q86YA3 2104 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 PRR22Q8IZ63 422 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 C10orf111Q8N326 155 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 POU5F2Q8N7G0 328 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 CDRT4Q8N9R6 151 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 SLC16A11Q8NCK7 471 aa7.53□□□□□ -1.2
CDH13-208ENST00000566333 VPS37AQ8NEZ2 397 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms