RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SNPHO15079 494 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 TO15178 435 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 CDH16O75309 829 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 GSTA1P08263 222 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 RHOXF2BP0C7M4 288 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 DRD2P14416 443 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 TIMP3P35625 211 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 PKNOX1P55347 436 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 DCAF7P61962 342 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 ACSM2AQ08AH3 577 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 SPIN4Q56A73 249 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 ACSM2BQ68CK6 577 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 SLC30A6Q6NXT4 461 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 POMZP3Q6PJE2 187 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 SCIMPQ6UWF3 145 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 ARSKQ6UWY0 536 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 YRDCQ86U90 279 aaKnown RBP16.71■□□□□ 0.27
USB1-213ENST00000566292 TMEM200AQ86VY9 491 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 LACC1Q8IV20 430 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 PM20D2Q8IYS1 436 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 FAM83FQ8NEG4 500 aaPredicted RBP16.71■□□□□ 0.27
USB1-213ENST00000566292 OR9A2Q8NGT5 310 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 C16orf78Q8WTQ4 265 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 KAT2AQ92830 837 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 EXOSC8Q96B26 276 aaKnown RBP16.71■□□□□ 0.27
USB1-213ENST00000566292 WDYHV1Q96HA8 205 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 RHOXF2Q9BQY4 288 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 EBPLQ9BY08 206 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 SLC24A3Q9HC58 644 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 PFDN4Q9NQP4 134 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 TBK1Q9UHD2 729 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 GPR55Q9Y2T6 319 aaPredicted RBP16.71■□□□□ 0.27
USB1-213ENST00000566292 MPDZO75970 2070 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 GNG14A0A1W2PPG7 69 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 FRG2CA6NGY1 282 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 UBFD1O14562 309 aaKnown RBP16.7■□□□□ 0.26
USB1-213ENST00000566292 ENO1P06733 434 aaKnown RBP16.7■□□□□ 0.26
USB1-213ENST00000566292 BMP5P22003 454 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 TIA1P31483 386 aaKnown RBP eCLIP16.7■□□□□ 0.26
USB1-213ENST00000566292 NAGLUP54802 743 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 FOXA1P55317 472 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 BTKQ06187 659 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 SNTA1Q13424 505 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 NSUN5P2Q63ZY6 315 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 GALNT18Q6P9A2 607 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 GSPT2Q8IYD1 628 aaKnown RBP16.7■□□□□ 0.26
USB1-213ENST00000566292 NRGNQ92686 78 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 ABTB1Q969K4 478 aaPredicted RBP16.7■□□□□ 0.26
USB1-213ENST00000566292 TMBIM1Q969X1 311 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 SH3GL2Q99962 352 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 KLRF1Q9NZS2 232 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 MAPRE3Q9UPY8 281 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 STK38LQ9Y2H1 464 aa16.7■□□□□ 0.26
USB1-213ENST00000566292 MED12LQ86YW9 2145 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 A0A1W2PPM1 405 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 SERTM1A2A2V5 107 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 PRAMEF25A6NGN4 478 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 G3V2L1 256 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 SYT5O00445 386 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 CT45A8P0DMV1 189 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 CT45A9P0DMV2 189 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 ZNF136P52737 540 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 CORO7P57737 925 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 CEBPEQ15744 281 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 PRSS53Q2L4Q9 553 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 CT45A2Q5DJT8 189 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 NPSR1Q6W5P4 371 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 SPNS3Q6ZMD2 512 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 SH2D5Q6ZV89 423 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 WDSUB1Q8N9V3 476 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 VSTM2LQ96N03 204 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 BTBD9Q96Q07 612 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 MID1IP1Q9NPA3 183 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 SERHLQ9NQF3 203 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 SLC35C2Q9NQQ7 365 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 SIRT5Q9NXA8 310 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 DCDC2Q9UHG0 476 aa16.69■□□□□ 0.26
USB1-213ENST00000566292 EXO1Q9UQ84 846 aaKnown RBP16.69■□□□□ 0.26
USB1-213ENST00000566292 OR6C70A6NIJ9 312 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 CD8B2A6NJW9 211 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 DVL2O14641 736 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 REM1O75628 298 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 BCAS2O75934 225 aaPredicted RBP16.68■□□□□ 0.26
USB1-213ENST00000566292 ZWINTO95229 277 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 ANXA4P09525 319 aaPredicted RBP16.68■□□□□ 0.26
USB1-213ENST00000566292 UQCRC1P31930 480 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 ASCL1P50553 236 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 HEPACAMQ14CZ8 416 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 ZZZ3Q8IYH5 903 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 SAMD14Q8IZD0 417 aaPredicted RBP16.68■□□□□ 0.26
USB1-213ENST00000566292 CCNYL1Q8N7R7 359 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 LRRN4CLQ8ND94 238 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 ERP27Q96DN0 273 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 SLC35A4Q96G79 324 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 COL21A1Q96P44 957 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 TRIB1Q96RU8 372 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 ZNF629Q9UEG4 869 aaPredicted RBP16.68■□□□□ 0.26
USB1-213ENST00000566292 PCNX3Q9H6A9 2034 aa16.68■□□□□ 0.26
USB1-213ENST00000566292 MBD3L4A6NDZ8 208 aaPredicted RBP16.67■□□□□ 0.26
USB1-213ENST00000566292 MBD3L3A6NE82 208 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms