RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ZNF708P17019 499 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 SSTR1P30872 391 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 STX2P32856 288 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 PTH2RP49190 550 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 RAP1GDS1P52306 607 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 CLDN18P56856 261 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 RPS13P62277 151 aaKnown RBP11.56□□□□□ -0.56
RNF40-208ENST00000565995 KRTAP1-1Q07627 177 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 ZKSCAN8Q15776 578 aaPredicted RBP11.56□□□□□ -0.56
RNF40-208ENST00000565995 BCL2A1Q16548 175 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 OR52E8Q6IFG1 317 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 CYS1Q717R9 158 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 ISCA2Q86U28 154 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 GALNT12Q8IXK2 581 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 STAG3L4Q8TBR4 150 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 PIK3IP1Q96FE7 263 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 PERPQ96FX8 193 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 NODALQ96S42 347 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 GPR22Q99680 433 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 NXF5Q9H1B4 397 aaKnown RBP11.56□□□□□ -0.56
RNF40-208ENST00000565995 METTL7AQ9H8H3 244 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 ACTR8Q9H981 624 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 CAB39LQ9H9S4 337 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 WDR41Q9HAD4 459 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 SMYD2Q9NRG4 433 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 ZNF701Q9NV72 531 aaPredicted RBP11.56□□□□□ -0.56
RNF40-208ENST00000565995 NUDT4Q9NZJ9 180 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 ZNF639Q9UID6 485 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 A0A087WUV0 522 aaPredicted RBP11.55□□□□□ -0.56
RNF40-208ENST00000565995 A0A1W2PS29 197 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 FOXE1O00358 373 aaPredicted RBP11.55□□□□□ -0.56
RNF40-208ENST00000565995 PLOD2O00469 737 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 PGRMC2O15173 223 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 ACOX3O15254 700 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 RIPK2O43353 540 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 UGDHO60701 494 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 TGM6O95932 706 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 H2AFXP16104 143 aaPredicted RBP11.55□□□□□ -0.56
RNF40-208ENST00000565995 EPB42P16452 691 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 STMN1P16949 149 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 PIK3R1P27986 724 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 SRD5A2P31213 254 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 UGT2B10P36537 528 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 GMPRP36959 345 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 MGAT2Q10469 447 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 MAP4K2Q12851 820 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 OR2A2Q6IF42 318 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 ZNF474Q6S9Z5 364 aaPredicted RBP11.55□□□□□ -0.56
RNF40-208ENST00000565995 CYP20A1Q6UW02 462 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 IFNEQ86WN2 208 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 RELL1Q8IUW5 271 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 PRR22Q8IZ63 422 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 GCNT2Q8N0V5 402 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 ATOH8Q96SQ7 321 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 MTERF1Q99551 399 aaKnown RBP11.55□□□□□ -0.56
RNF40-208ENST00000565995 OSBPL11Q9BXB4 747 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 UBTD1Q9HAC8 227 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 OPTCQ9UBM4 332 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 CFL2Q9Y281 166 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 DTX4Q9Y2E6 619 aa11.55□□□□□ -0.56
RNF40-208ENST00000565995 PHGDHO43175 533 aaKnown RBP11.54□□□□□ -0.56
RNF40-208ENST00000565995 CGAP01215 116 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 S100BP04271 92 aaPredicted RBP11.54□□□□□ -0.56
RNF40-208ENST00000565995 GSTA2P09210 222 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 KRT15P19012 456 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 CCKARP32238 428 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 HSD17B3P37058 310 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 KIR2DL2P43627 348 aaPredicted RBP11.54□□□□□ -0.56
RNF40-208ENST00000565995 STARP49675 285 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 XKP51811 444 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 GPX6P59796 221 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 SRYQ05066 204 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 IFFO1Q0D2I5 559 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 UBAP2Q5T6F2 1119 aaKnown RBP11.54□□□□□ -0.56
RNF40-208ENST00000565995 DESI1Q6ICB0 168 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 AAGABQ6PD74 315 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 PLXDC2Q6UX71 529 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 C3orf62Q6ZUJ4 267 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 PLEKHM3Q6ZWE6 761 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 PLCZ1Q86YW0 608 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 MREGQ8N565 214 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 MEIOBQ8N635 442 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 OR4K14Q8NGD5 310 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 OR14L1PQ8NHC6 308 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 WDR20Q8TBZ3 569 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 FBF1Q8TES7 1133 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 RNF138Q8WVD3 245 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 CDKL2Q92772 493 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 PGM2Q96G03 612 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 LCORQ96JN0 433 aaPredicted RBP11.54□□□□□ -0.56
RNF40-208ENST00000565995 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 RBBP8Q99708 897 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 TXLNGYQ9BZA5 131 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 GALNT9Q9HCQ5 603 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 SERHLQ9NQF3 203 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 KLHL28Q9NXS3 571 aa11.54□□□□□ -0.56
RNF40-208ENST00000565995 EXOC1LA0A1B0GW35 172 aa11.53□□□□□ -0.56
RNF40-208ENST00000565995 TCRBV9S1A1TA0A576 114 aa11.53□□□□□ -0.56
RNF40-208ENST00000565995 FRG2CA6NGY1 282 aa11.53□□□□□ -0.56
RNF40-208ENST00000565995 OR6C70A6NIJ9 312 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms