RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 FZR1Q9UM11 496 aa3.5□□□□□ -1.85
CHD9-215ENST00000565442 RNF24Q9Y225 148 aa3.5□□□□□ -1.85
CHD9-215ENST00000565442 ABCC4O15439 1325 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 BICDL2A1A5D9 508 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 TRABD2BA6NFA1 517 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 LGALS8O00214 317 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 IGSF6O95976 241 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 TSPAN8P19075 237 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 ASMTP46597 345 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 ARHGDIAP52565 204 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 BNIP1Q12981 228 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 ZSWIM7Q19AV6 140 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 PARP6Q2NL67 630 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 LRIT3Q3SXY7 679 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 P4HA3Q7Z4N8 544 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 ARFGAP2Q8N6H7 521 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 FAM71CQ8NEG0 241 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 ANKRD20A12PQ8NF67 263 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 FLVCR1-AS1Q8TAF5 88 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 DLX4Q92988 240 aaPredicted RBP3.49□□□□□ -1.85
CHD9-215ENST00000565442 NCLNQ969V3 563 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 C14orf79Q96F83 325 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 TSPAN18Q96SJ8 248 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 TSPY26PQ9H489 355 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 ACTR8Q9H981 624 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 FAM114A2Q9NRY5 505 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 CENPMQ9NSP4 180 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 CIDEBQ9UHD4 219 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 ZNF490Q9ULM2 529 aaPredicted RBP3.49□□□□□ -1.85
CHD9-215ENST00000565442 CSAG2Q9Y5P2 127 aa3.49□□□□□ -1.85
CHD9-215ENST00000565442 TRAV9-2A0A087WT02 112 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 NPIPA5A0A0B4J1W7 369 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 IGKV6D-41A0A0C4DH26 115 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 LRIT2A6NDA9 550 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 MFSD2BA6NFX1 497 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 ZNF487B1APH4 448 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 E9PAM4 449 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 NPIPA5E9PKD4 350 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 SDC3O75056 442 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 B3GALNT1O75752 331 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 AKR7A3O95154 331 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 BCL3P20749 454 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 DNAJB1P25685 340 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 SLC8A3P57103 927 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 TRA2BP62995 288 aaKnown RBP3.48□□□□□ -1.85
CHD9-215ENST00000565442 HERVK_113P63132 956 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 ERVK-8P63133 956 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 ZNF85Q03923 595 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 RFTN1Q14699 578 aaPredicted RBP3.48□□□□□ -1.85
CHD9-215ENST00000565442 ACSF3Q4G176 576 aaPredicted RBP3.48□□□□□ -1.85
CHD9-215ENST00000565442 EIPR1Q53HC9 387 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 LINC00242Q5T6M2 205 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 SEL1L3Q68CR1 1132 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 STOX1Q6ZVD7 989 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 TSEN54Q7Z6J9 526 aaKnown RBP3.48□□□□□ -1.85
CHD9-215ENST00000565442 SLC22A18ASQ8N1D0 253 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 FGFRL1Q8N441 504 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 ARL14Q8N4G2 192 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 TBCKQ8TEA7 893 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 CRYGNQ8WXF5 182 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 MCHR2Q969V1 340 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 RPP25Q9BUL9 199 aaKnown RBP3.48□□□□□ -1.85
CHD9-215ENST00000565442 ERVK-6Q9BXR3 956 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 GPR83Q9NYM4 423 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 P2RX2Q9UBL9 471 aa3.48□□□□□ -1.85
CHD9-215ENST00000565442 PURGQ9UJV8 347 aaKnown RBP3.48□□□□□ -1.85
CHD9-215ENST00000565442 C19orf81C9J6K1 198 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 H0YL77 283 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.47□□□□□ -1.85
CHD9-215ENST00000565442 E2F3O00716 465 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 IMPA2O14732 288 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 ZNF253O75346 499 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 WNT2P09544 360 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 FAM200BP0CF97 657 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 PTPN6P29350 595 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 ELK3P41970 407 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 CD86P42081 329 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 POU3F4P49335 361 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 CSRP3P50461 194 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 IST1P53990 364 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 HMGCS2P54868 508 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 MTTPP55157 894 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 ZNF33BQ06732 778 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 SMC1AQ14683 1233 aaKnown RBP3.47□□□□□ -1.85
CHD9-215ENST00000565442 SLC22A6Q4U2R8 563 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 HIGD2BQ4VC39 106 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 MS4A13Q5J8X5 152 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 BEND6Q5SZJ8 279 aaPredicted RBP3.47□□□□□ -1.85
CHD9-215ENST00000565442 PRR5LQ6MZQ0 368 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 PNCKQ6P2M8 343 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 UNC5DQ6UXZ4 953 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 PAQR9Q6ZVX9 377 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 CEACAM19Q7Z692 300 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 SYVN1Q86TM6 617 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 SPAG16Q8N0X2 631 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 OR52B4Q8NGK2 314 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 MCCC1Q96RQ3 725 aaPredicted RBP3.47□□□□□ -1.85
CHD9-215ENST00000565442 AMBNQ9NP70 447 aa3.47□□□□□ -1.85
CHD9-215ENST00000565442 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms