RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 C16orf52Q8NHV5 167 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 BCAS4Q8TDM0 211 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 DOK4Q8TEW6 326 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 TP53INP1Q96A56 240 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 VPS33AQ96AX1 596 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 LMF1Q96S06 567 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 ABI3Q9P2A4 366 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 SNX8Q9Y5X2 465 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 HIVEP3Q5T1R4 2406 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 C2orf92A0A1B0GVN3 265 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 RFXANKO14593 260 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 SOX30O94993 753 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 PSMG1O95456 288 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 CPSF4O95639 269 aaKnown RBP24.01■■□□□ 1.43
NME3-208ENST00000565379 ABCB1P08183 1280 aaPredicted RBP24.01■■□□□ 1.43
NME3-208ENST00000565379 UQCRC2P22695 453 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 CCT3P49368 545 aaKnown RBP24.01■■□□□ 1.43
NME3-208ENST00000565379 EMDP50402 254 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 EXOSC7Q15024 291 aaKnown RBP24.01■■□□□ 1.43
NME3-208ENST00000565379 EBPQ15125 230 aaKnown RBP24.01■■□□□ 1.43
NME3-208ENST00000565379 VPS26BQ4G0F5 336 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 C9orf40Q8IXQ3 194 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 NUP43Q8NFH3 380 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 FAM120BQ96EK7 910 aaKnown RBP24.01■■□□□ 1.43
NME3-208ENST00000565379 MS4A4EQ96PG1 132 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 WWTR1Q9GZV5 400 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 MYLK2Q9H1R3 596 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 CXorf36Q9H7Y0 433 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 SLC52A3Q9NQ40 469 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 ZCCHC3Q9NUD5 404 aaKnown RBP24.01■■□□□ 1.43
NME3-208ENST00000565379 MAP10Q9P2G4 905 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 MYOTQ9UBF9 498 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 LEF1Q9UJU2 399 aaPredicted RBP24.01■■□□□ 1.43
NME3-208ENST00000565379 NDUFAF1Q9Y375 327 aa24.01■■□□□ 1.43
NME3-208ENST00000565379 BBIP1A8MTZ0 92 aa24■■□□□ 1.43
NME3-208ENST00000565379 A8MUI8 341 aa24■■□□□ 1.43
NME3-208ENST00000565379 ANGPT2O15123 496 aa24■■□□□ 1.43
NME3-208ENST00000565379 ZCCHC18P0CG32 403 aa24■■□□□ 1.43
NME3-208ENST00000565379 SOX11P35716 441 aa24■■□□□ 1.43
NME3-208ENST00000565379 MRPL49Q13405 166 aaKnown RBP24■■□□□ 1.43
NME3-208ENST00000565379 COQ5Q5HYK3 327 aa24■■□□□ 1.43
NME3-208ENST00000565379 ISLR2Q6UXK2 745 aa24■■□□□ 1.43
NME3-208ENST00000565379 GK5Q6ZS86 529 aa24■■□□□ 1.43
NME3-208ENST00000565379 HPS6Q86YV9 775 aa24■■□□□ 1.43
NME3-208ENST00000565379 SLC15A4Q8N697 577 aa24■■□□□ 1.43
NME3-208ENST00000565379 LRRC37BQ96QE4 947 aa24■■□□□ 1.43
NME3-208ENST00000565379 SERHLQ9NQF3 203 aa24■■□□□ 1.43
NME3-208ENST00000565379 KRT16P08779 473 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 CAPN3P20807 821 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 PRIM2P49643 509 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 DUSP8Q13202 625 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 ZNHIT3Q15649 155 aaPredicted RBP23.99■■□□□ 1.43
NME3-208ENST00000565379 ACER2Q5QJU3 275 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 ABHD17BQ5VST6 288 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 CISD2Q8N5K1 135 aaKnown RBP23.99■■□□□ 1.43
NME3-208ENST00000565379 SIRT6Q8N6T7 355 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 RP9Q8TA86 221 aaKnown RBP23.99■■□□□ 1.43
NME3-208ENST00000565379 TM9SF4Q92544 642 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 GTF2H4Q92759 462 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 MAGED4Q96JG8 741 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 PHF12Q96QT6 1004 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 CCDC106Q9BWC9 280 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 YARS2Q9Y2Z4 477 aaKnown RBP23.99■■□□□ 1.43
NME3-208ENST00000565379 ICE1Q9Y2F5 2266 aa23.99■■□□□ 1.43
NME3-208ENST00000565379 ERN1O75460 977 aaKnown RBP23.98■■□□□ 1.43
NME3-208ENST00000565379 ANP32DO95626 131 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 DRD5P21918 477 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 SOAT1P35610 550 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 PPICP45877 212 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 MLF1P58340 268 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 TXNL4AP83876 142 aaKnown RBP23.98■■□□□ 1.43
NME3-208ENST00000565379 STX5Q13190 355 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 MFAP5Q13361 173 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 TLR1Q15399 786 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 C4orf17Q53FE4 359 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 C6orf10Q5SRN2 563 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 IGFL3Q6UXB1 125 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 TAGAPQ8N103 731 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 ZNF441Q8N8Z8 693 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 CDRT4Q8N9R6 151 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 ADIPOR1Q96A54 375 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 SNRNP40Q96DI7 357 aaKnown RBP23.98■■□□□ 1.43
NME3-208ENST00000565379 GAL3ST4Q96RP7 486 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 CDCP1Q9H5V8 836 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 EPS8L2Q9H6S3 715 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 FOLH1BQ9HBA9 442 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 ASF1BQ9NVP2 202 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 STMN3Q9NZ72 180 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 ARMCX1Q9P291 453 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 B3GNT3Q9Y2A9 372 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 NTNG1Q9Y2I2 539 aa23.98■■□□□ 1.43
NME3-208ENST00000565379 A0A096LPI6 279 aa23.97■■□□□ 1.43
NME3-208ENST00000565379 ACOX3O15254 700 aa23.97■■□□□ 1.43
NME3-208ENST00000565379 PRKNO60260 465 aaPredicted RBP23.97■■□□□ 1.43
NME3-208ENST00000565379 RNF224P0DH78 156 aa23.97■■□□□ 1.43
NME3-208ENST00000565379 MAGEA8P43361 318 aa23.97■■□□□ 1.43
NME3-208ENST00000565379 PRKAG1P54619 331 aa23.97■■□□□ 1.43
NME3-208ENST00000565379 CYLC2Q14093 348 aaPredicted RBP23.97■■□□□ 1.43
NME3-208ENST00000565379 ZNF621Q6ZSS3 439 aa23.97■■□□□ 1.43
NME3-208ENST00000565379 SZRD1Q7Z422 152 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms