RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NME6O75414 186 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 ERAL1O75616 437 aaKnown RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 CBR3O75828 277 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 RCBTB2O95199 551 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 ATE1O95260 518 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 OTCP00480 354 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 INHBAP08476 426 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 CT45A8P0DMV1 189 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 CT45A9P0DMV2 189 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 PCSK2P16519 638 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 DNASE1P24855 282 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 CNTFP26441 200 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 OPRM1P35372 400 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 HSD17B3P37058 310 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 ARL1P40616 181 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 GAS1P54826 345 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 DCAF7P61962 342 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 RAE1P78406 368 aaKnown RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 MRPS35P82673 323 aaKnown RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 SORDQ00796 357 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 HMGCS1Q01581 520 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 LTB4RQ15722 352 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 TSNAXIP1Q2TAA8 658 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 CT45A2Q5DJT8 189 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF628Q5EBL2 1059 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 TCHHL1Q5QJ38 904 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 PLXDC2Q6UX71 529 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 PAMR1Q6UXH9 720 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 CAMKMTQ7Z624 323 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 KIF18BQ86Y91 864 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 TRIM42Q8IWZ5 723 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 C1orf52Q8N6N3 182 aaKnown RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 DCAKDQ8WVC6 231 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 SELENOMQ8WWX9 145 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 LRRC46Q96FV0 321 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 HBEGFQ99075 208 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 PAFAH2Q99487 392 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 MRPL57Q9BQC6 102 aaKnown RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 OSBPL11Q9BXB4 747 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 OR2B2Q9GZK3 357 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 MRPL46Q9H2W6 279 aaKnown RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 CDC42EP4Q9H3Q1 356 aaKnown RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 GSX1Q9H4S2 264 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 ANKRA2Q9H9E1 313 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 SERHLQ9NQF3 203 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 CLCF1Q9UBD9 225 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 VPS29Q9UBQ0 182 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 DMGDHQ9UI17 866 aaKnown RBP7.8□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF180Q9UJW8 692 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 PSME2Q9UL46 239 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 MAPRE3Q9UPY8 281 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 DOCK7Q96N67 2140 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 PRAMEF25A6NGN4 478 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 OR6C70A6NIJ9 312 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 A8MT66 165 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 TRIM49D1C9J1S8 452 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 EEF1E1-BLOC1S5C9J1V9 151 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 MANBAO00462 879 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 EEF1E1O43324 174 aaKnown RBP7.79□□□□□ -1.16
CAPN3-213ENST00000565173 ZIC3O60481 467 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 TSPAN2O60636 221 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 OR4F21O95013 312 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 HRGP04196 525 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 TMIGD3P0DMS9 266 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-213ENST00000565173 CYP4B1P13584 511 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 FOSL1P15407 271 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 CHN1P15882 459 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 KRT15P19012 456 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 ECHS1P30084 290 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 HOXC12P31275 282 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 DEKP35659 375 aaKnown RBP7.79□□□□□ -1.16
CAPN3-213ENST00000565173 STARP49675 285 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 SERPINB9P50453 376 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 LHX2P50458 406 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 DGKQP52824 942 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 TRA2BP62995 288 aaKnown RBP7.79□□□□□ -1.16
CAPN3-213ENST00000565173 CLCQ05315 142 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 CKAP4Q07065 602 aaKnown RBP7.79□□□□□ -1.16
CAPN3-213ENST00000565173 PLCXD2Q0VAA5 305 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 RCAN2Q14206 197 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 DEFB113Q30KQ7 82 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 UNC50Q53HI1 259 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 C6orf163Q5TEZ5 329 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 C8orf74Q6P047 294 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 NPSR1Q6W5P4 371 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 PLCZ1Q86YW0 608 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 KRTAP1-3Q8IUG1 177 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 CCDC116Q8IYX3 515 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 KIF18AQ8NI77 898 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF675Q8TD23 568 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 TMBIM1Q969X1 311 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 KLHL29Q96CT2 875 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 C11orf24Q96F05 449 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-213ENST00000565173 SLC35A4Q96G79 324 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 VSTM2LQ96N03 204 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 DACH2Q96NX9 599 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 COL21A1Q96P44 957 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 BTBD9Q96Q07 612 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 RBM24Q9BX46 236 aaKnown RBP7.79□□□□□ -1.16
CAPN3-213ENST00000565173 GALNT8Q9NY28 637 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms