RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 OR4D2P58180 307 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 RPS3AP61247 264 aaKnown RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 DCAF7P61962 342 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 NKX3-2P78367 333 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 VLDLRP98155 873 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CNKSR3Q6P9H4 555 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 MCEMP1Q8IX19 187 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CMIPQ8IY22 773 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 POMGNT2Q8NAT1 580 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 OR9A4Q8NGU2 314 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 ZFP90Q8TF47 636 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 FRS2Q8WU20 508 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 FGF13Q92913 245 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 IL12RB2Q99665 862 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 MAPKAP1Q9BPZ7 522 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CST11Q9H112 138 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 OR7A17O14581 309 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 HTRA2O43464 458 aaPredicted RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 PRAF2O60831 178 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 ZNF623O75123 536 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 IFNA1P01562 189 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 PVRP15151 417 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 FUT1P19526 365 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SLC5A2P31639 672 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SLC6A8P48029 635 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 NFYCQ13952 458 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 ZNF628Q5EBL2 1059 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 PLEKHG7Q6ZR37 379 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SYT13Q7L8C5 426 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 THOC6Q86W42 341 aaKnown RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-213ENST00000564845 FBXW8Q8N3Y1 598 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SFRP1Q8N474 314 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 MINDY1Q8N5J2 469 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CAMKK1Q8N5S9 505 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SPERTQ8NA61 448 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 C2CD4AQ8NCU7 369 aaPredicted RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 OR2A12Q8NGT7 310 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 RAB8BQ92930 207 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 NARS2Q96I59 477 aaKnown RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 SARGQ9BW04 601 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 KLF16Q9BXK1 252 aaPredicted RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 PDFQ9HBH1 243 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 INPP5EQ9NRR6 644 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 YARS2Q9Y2Z4 477 aaKnown RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 CLCA3PQ9Y6N3 262 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 TMEM189-UBE2V1I3L0A0 370 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 MOSPD3O75425 235 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CLDN9O95484 217 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 GALK2Q01415 458 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 EIF3IQ13347 325 aaKnown RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 FAM78AQ5JUQ0 283 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 HMBOX1Q6NT76 420 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 GOLGA7Q7Z5G4 137 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SPRED1Q7Z699 444 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 GPAT4Q86UL3 456 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 PARGQ86W56 976 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 PLXDC1Q8IUK5 500 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 NRSN1Q8IZ57 195 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 ASB17Q8WXJ9 295 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 HIST1H2AAQ96QV6 131 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SYT3Q9BQG1 590 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 NUAK2Q9H093 628 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 EPHX3Q9H6B9 360 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 ACTR8Q9H981 624 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 A8MU76 341 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CD22P20273 847 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 ATP5F1P24539 256 aaPredicted RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 GJA8P48165 433 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 RPS15AP62244 130 aaKnown RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 SPOCK1Q08629 439 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 NHSL2Q5HYW2 709 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 TPRG1LQ5T0D9 272 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 OGFOD2Q6N063 350 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 FAM83HQ6ZRV2 1179 aaPredicted RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 NUDT13Q86X67 352 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 GPR22Q99680 433 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 MICU1Q9BPX6 476 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SGK2Q9HBY8 427 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SPANXA1Q9NS26 97 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 LINC00854A0A1B0GVQ3 168 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 HCRTR1O43613 425 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 ASNA1O43681 348 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SOD2P04179 222 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CCKBRP32239 447 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 THBS2P35442 1172 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 UGT2B15P54855 530 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CRYZQ08257 329 aaKnown RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 SSX2Q16385 188 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 SPANXN4Q5MJ08 99 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 LYRM7Q5U5X0 104 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 NKAIN2Q5VXU1 208 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 FCRLBQ6BAA4 426 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 KCTD18Q6PI47 426 aaPredicted RBP3.18□□□□□ -1.9
CHD9-213ENST00000564845 TMEM220Q6QAJ8 160 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 CCDC81Q6ZN84 652 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 LARP4Q71RC2 724 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-213ENST00000564845 CNTN4Q8IWV2 1026 aa3.18□□□□□ -1.9
CHD9-213ENST00000564845 MS4A15Q8N5U1 240 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms