RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CHDHQ8NE62 594 aaPredicted RBP6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 OR10G2Q8NGC3 310 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 FLVCR1-AS1Q8TAF5 88 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 UTP15Q8TED0 518 aaKnown RBP6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 RSC1A1Q92681 617 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 RAB8BQ92930 207 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 MAGED4Q96JG8 741 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 SERINC2Q96SA4 455 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 PITX2Q99697 317 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 BARD1Q99728 777 aaKnown RBP6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ZFYVE21Q9BQ24 234 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 MACROD1Q9BQ69 325 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 NUDT22Q9BRQ3 303 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 SPATA5L1Q9BVQ7 753 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TWSG1Q9GZX9 223 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ADNPQ9H2P0 1102 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 OR51I1Q9H343 314 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TRIM45Q9H8W5 580 aaPredicted RBP6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 C3orf14Q9HBI5 128 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 PRDM9Q9NQV7 894 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 NDUFAF4Q9P032 175 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 KLHL3Q9UH77 587 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 RSL24D1Q9UHA3 163 aaKnown RBP6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 POFUT2Q9Y2G5 429 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ATG4BQ9Y4P1 393 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 LYVE1Q9Y5Y7 322 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ZNF780BQ9Y6R6 833 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ENPP4Q9Y6X5 453 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 SPACA6W5XKT8 324 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 SPTA1P02549 2419 aa6.98□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ARRDC5A6NEK1 342 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 GLOD5A6NK44 160 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 A8MU76 341 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 A8MVJ9 347 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TMEM229AB2RXF0 380 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 D6RAR5 112 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 SLC1A7O00341 560 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 HMGN4O00479 90 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 NTN3O00634 580 aaPredicted RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ZSCAN9O15535 394 aaPredicted RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 P2RX6O15547 441 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 PROM1O43490 865 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 PRAMEF10O60809 474 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 CTSVO60911 334 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ANKRD17O75179 2603 aaKnown RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 UBXN7O94888 489 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 CCNB2O95067 398 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TFPTP0C1Z6 253 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 CCDC159P0C7I6 412 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 OR12D1P0DN82 309 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 NR2F1P10589 423 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 CYP4B1P13584 511 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ETS2P15036 469 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 RHCEP18577 417 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TNFRSF1BP20333 461 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 CD247P20963 164 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 MATN1P21941 496 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 CRHBPP24387 322 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TLX1P31314 330 aaPredicted RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 MPIP34949 423 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 YAP1P46937 504 aaKnown RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 GPLD1P80108 840 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TARDBPQ13148 414 aaKnown RBP eCLIP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 DSG2Q14126 1118 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 NR1D2Q14995 579 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 EXOC3L2Q2M3D2 409 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ZBED5Q49AG3 693 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 C6orf141Q5SZD1 244 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 PRAMEF8Q5VWM4 474 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 PRAMEF7Q5VXH5 474 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 C18orf63Q68DL7 685 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 FCRL6Q6DN72 434 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 KCTD8Q6ZWB6 473 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 RNF44Q7L0R7 432 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TMPRSS7Q7RTY8 843 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ZNF438Q7Z4V0 828 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 B3GNT8Q7Z7M8 397 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TMPRSS12Q86WS5 348 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ALDH16A1Q8IZ83 802 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 COL27A1Q8IZC6 1860 aaPredicted RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 LRRC25Q8N386 305 aaPredicted RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 SMYD1Q8NB12 490 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 KCT2Q8NC54 265 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 OR4C15Q8NGM1 316 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 SUN3Q8TAQ9 357 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 MIPOL1Q8TD10 442 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ADAMTS16Q8TE57 1224 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 PHF10Q8WUB8 498 aaKnown RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 FBLIM1Q8WUP2 373 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 SLC38A5Q8WUX1 472 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 ZNF566Q969W8 418 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 NMD3Q96D46 503 aaKnown RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TM4SF19Q96DZ7 209 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 COL21A1Q96P44 957 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 OR2A5Q96R48 311 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 MAPKAP1Q9BPZ7 522 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 TUBA1CQ9BQE3 449 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 PSD2Q9BQI7 771 aa6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 NPLQ9BXD5 320 aaPredicted RBP6.97□□□□□ -1.29
MAP1LC3B-205ENST00000564638 GABARAPL3Q9BY60 117 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms