RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 NAGAP17050 411 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 IGFBP2P18065 325 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 DRD5P21918 477 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 PTPN6P29350 595 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 KRT20P35900 424 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 PPICP45877 212 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 HCFC1P51610 2035 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 CORO7P57737 925 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 DCAF7P61962 342 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 ZNF763Q0D2J5 394 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 C2orf80Q0P641 193 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 ZNF155Q12901 538 aaPredicted RBP16.15■□□□□ 0.18
NME3-205ENST00000563854 CCDC153Q494R4 210 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 ACSF3Q4G176 576 aaPredicted RBP16.15■□□□□ 0.18
NME3-205ENST00000563854 TIGD3Q6B0B8 471 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 FRMD7Q6ZUT3 714 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 YRDCQ86U90 279 aaKnown RBP16.15■□□□□ 0.18
NME3-205ENST00000563854 TMEM200AQ86VY9 491 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 DMRTC2Q8IXT2 367 aaPredicted RBP16.15■□□□□ 0.18
NME3-205ENST00000563854 SAMD14Q8IZD0 417 aaPredicted RBP16.15■□□□□ 0.18
NME3-205ENST00000563854 C4orf33Q8N1A6 199 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 ZNF675Q8TD23 568 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 TIMP4Q99727 224 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 TREX2Q9BQ50 279 aaPredicted RBP16.15■□□□□ 0.18
NME3-205ENST00000563854 ZNF559Q9BR84 538 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 UBQLN3Q9H347 655 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 SERHLQ9NQF3 203 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 MIEF1Q9NQG6 463 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 POLR3HQ9Y535 204 aaPredicted RBP16.15■□□□□ 0.18
NME3-205ENST00000563854 PDZD2O15018 2839 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 CSMD2Q7Z408 3487 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 PLIN3O60664 434 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 CDH16O75309 829 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 ERN1O75460 977 aaKnown RBP16.14■□□□□ 0.17
NME3-205ENST00000563854 BCAS2O75934 225 aaPredicted RBP16.14■□□□□ 0.17
NME3-205ENST00000563854 IL12BP29460 328 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 CCT5P48643 541 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 SNTB1Q13884 538 aaKnown RBP16.14■□□□□ 0.17
NME3-205ENST00000563854 SLC25A35Q3KQZ1 300 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 DCST1Q5T197 706 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 SLC30A6Q6NXT4 461 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 SEM1Q6ZVN7 128 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 CDH24Q86UP0 819 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 PM20D2Q8IYS1 436 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 CNPY4Q8N129 248 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 FAM83FQ8NEG4 500 aaPredicted RBP16.14■□□□□ 0.17
NME3-205ENST00000563854 COL21A1Q96P44 957 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 TRIB1Q96RU8 372 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 ADOQ96SZ5 270 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 UGT2B28Q9BY64 529 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 FOLH1BQ9HBA9 442 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 GRID1Q9ULK0 1009 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 OTOGQ6ZRI0 2925 aa16.14■□□□□ 0.17
NME3-205ENST00000563854 HSPB2A8KAH6 182 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 AHRRA9YTQ3 701 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 SNPHO15079 494 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 JUNP05412 331 aaKnown RBP16.13■□□□□ 0.17
NME3-205ENST00000563854 CPA3P15088 417 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 BMP7P18075 431 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 BMP5P22003 454 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 TCEA1P23193 301 aaKnown RBP16.13■□□□□ 0.17
NME3-205ENST00000563854 MPIP34949 423 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 GCKP35557 465 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 PTGDSP41222 190 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 NCBP2P52298 156 aaKnown RBP eCLIP16.13■□□□□ 0.175e-6■■□□□ 11.5
NME3-205ENST00000563854 HSPB2Q16082 182 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 SH2D4BQ5SQS7 431 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 CLEC6AQ6EIG7 209 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 GALNT18Q6P9A2 607 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 SLC44A2Q8IWA5 706 aaPredicted RBP16.13■□□□□ 0.17
NME3-205ENST00000563854 TNIP2Q8NFZ5 429 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 OR7G2Q8NG99 324 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 OR14L1PQ8NHC6 308 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 ABTB1Q969K4 478 aaPredicted RBP16.13■□□□□ 0.17
NME3-205ENST00000563854 TMCO6Q96DC7 493 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 BTBD9Q96Q07 612 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 TNFRSF12AQ9NP84 129 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 GPR55Q9Y2T6 319 aaPredicted RBP16.13■□□□□ 0.17
NME3-205ENST00000563854 OR10H1Q9Y4A9 318 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 PCDHGB3Q9Y5G1 929 aa16.13■□□□□ 0.17
NME3-205ENST00000563854 TACC2O95359 2948 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 TLDC2A0PJX2 215 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 TO15178 435 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 KRT4P19013 534 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 DDCP20711 480 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 NTSP30990 170 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 UQCRC1P31930 480 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 CRHR1P34998 444 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 MC3RP41968 323 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 GSTM5P46439 218 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 VASNQ6EMK4 673 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 TMEM107Q6UX40 140 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 NPSR1Q6W5P4 371 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 SH2D5Q6ZV89 423 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 LARP4Q71RC2 724 aaKnown RBP eCLIP16.12■□□□□ 0.17
NME3-205ENST00000563854 LACC1Q8IV20 430 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 EIF1ADQ8N9N8 165 aaKnown RBP16.12■□□□□ 0.17
NME3-205ENST00000563854 NAXEQ8NCW5 288 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 EFHD2Q96C19 240 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms