RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SLCO5A1Q9H2Y9 848 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 ACBD3Q9H3P7 528 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 DDX31Q9H8H2 851 aaKnown RBP9.32□□□□□ -0.92
SF3B3-204ENST00000563739 METTL7AQ9H8H3 244 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 ACTR8Q9H981 624 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 POPDC3Q9HBV1 291 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 PSD3Q9NYI0 1048 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 MOCS1Q9NZB8 636 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 MAT2BQ9NZL9 334 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 RNF14Q9UBS8 474 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 PHF11Q9UIL8 331 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 CES1P1Q9UKY3 287 aa9.32□□□□□ -0.92
SF3B3-204ENST00000563739 MTO1Q9Y2Z2 717 aaKnown RBP9.32□□□□□ -0.92
SF3B3-204ENST00000563739 UQCRHLA0A096LP55 91 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 C16orf97H3BN30 126 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 EMC8O43402 210 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 OR10H2O60403 315 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 CCNT2O60583 730 aaKnown RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 AQP8O94778 261 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 GBAP04062 536 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 FAM58BPP0C7Q3 252 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 PCNAP12004 261 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 MTHFD2P13995 350 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 NAGAP17050 411 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 TCEA1P23193 301 aaKnown RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 HPDP32754 393 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 CDKN1AP38936 164 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 PAFAH1B1P43034 410 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 SLC6A8P48029 635 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 TMED10P49755 219 aaKnown RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 BIKQ13323 160 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 DDX39BQ13838 428 aaKnown RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 SETDB1Q15047 1291 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 ZKSCAN8Q15776 578 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 PRICKLE4Q2TBC4 344 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 BEX5Q5H9J7 111 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 CDKL4Q5MAI5 379 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 C6orf52Q5T4I8 152 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 SULT1C3Q6IMI6 304 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 MED27Q6P2C8 311 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 ENPP6Q6UWR7 440 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 NPSR1Q6W5P4 371 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 LRRC70Q7Z2Q7 622 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 PLCZ1Q86YW0 608 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 TCAIMQ8N3R3 496 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 CNEP1R1Q8N9A8 125 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 FNDC9Q8TBE3 224 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 ZNF845Q96IR2 970 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 UBXN10Q96LJ8 280 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 ATOH8Q96SQ7 321 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 MTERF1Q99551 399 aaKnown RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 CD244Q9BZW8 370 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 RHOJQ9H4E5 214 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 YAE1D1Q9NRH1 226 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 MS4A12Q9NXJ0 267 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 ELOVL5Q9NYP7 299 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 TAS2R10Q9NYW0 307 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 TSC22D4Q9Y3Q8 395 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 MAGED1Q9Y5V3 778 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-204ENST00000563739 SPACA6W5XKT8 324 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 NOTCH1P46531 2555 aa9.31□□□□□ -0.92
SF3B3-204ENST00000563739 SLC22A20A6NK97 555 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 CXorf49A8MYA2 514 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-204ENST00000563739 CCDC188H7C350 402 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 TO15178 435 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 TSPAN2O60636 221 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 TMCC2O75069 709 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 ADAM11O75078 769 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 CBR3O75828 277 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 CD8AP01732 235 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 FAM157CP0CG43 387 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 EMDP50402 254 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 CLDN20P56880 219 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 SNTA1Q13424 505 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 LAPTM5Q13571 262 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 LTB4RQ15722 352 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 BCL2A1Q16548 175 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 KBTBD12Q3ZCT8 623 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 OR5M10Q6IEU7 315 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 OR52E8Q6IFG1 317 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 ADAM5Q6NVV9 412 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 NUP54Q7Z3B4 507 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 FADS6Q8N9I5 356 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 WDR20Q8TBZ3 569 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 AKAP1Q92667 903 aaKnown RBP eCLIP9.3□□□□□ -0.92
SF3B3-204ENST00000563739 RGMAQ96B86 450 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 SLC35A4Q96G79 324 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 PLPPR2Q96GM1 343 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 SFXN2Q96NB2 322 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 KRT12Q99456 494 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 NAT9Q9BTE0 207 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 C19orf24Q9BVV8 132 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 ANKRA2Q9H9E1 313 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 LYARQ9NX58 379 aaKnown RBP9.3□□□□□ -0.92
SF3B3-204ENST00000563739 GDF2Q9UK05 429 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-204ENST00000563739 LAMP3Q9UQV4 416 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 PLLPQ9Y342 182 aa9.3□□□□□ -0.92
SF3B3-204ENST00000563739 CMYA5Q8N3K9 4069 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 IGHV4-30-2A0A087WSY4 118 aa9.29□□□□□ -0.92
SF3B3-204ENST00000563739 CAPN14A8MX76 684 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms