RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
NME3-204ENST00000563498 KLC3Q6P597 504 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 FAM111BQ6SJ93 734 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 PLCZ1Q86YW0 608 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 GCNT2Q8N0V5 402 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 FBF1Q8TES7 1133 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 NUDT8Q8WV74 236 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 TMCO6Q96DC7 493 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 GPR78Q96P69 363 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 NTMT1Q9BV86 223 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 MRPL1Q9BYD6 325 aaKnown RBP16.94■□□□□ 0.3
NME3-204ENST00000563498 NOL11Q9H8H0 719 aaKnown RBP16.94■□□□□ 0.3
NME3-204ENST00000563498 TAS2R10Q9NYW0 307 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 PRODH2Q9UF12 536 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 DLGAP4Q9Y2H0 992 aa16.94■□□□□ 0.3
NME3-204ENST00000563498 MRPS18CQ9Y3D5 142 aaKnown RBP16.94■□□□□ 0.3
NME3-204ENST00000563498 A0A1W2PNV4 684 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 FRG2CA6NGY1 282 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 OR6C70A6NIJ9 312 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 PLOD2O00469 737 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 CTIFO43310 598 aaKnown RBP16.93■□□□□ 0.3
NME3-204ENST00000563498 HCRTR2O43614 444 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 ABCB7O75027 752 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 CBX7O95931 251 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 ZNF708P17019 499 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 MC3RP41968 323 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 MAGEA4P43358 317 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 CLDN18P56856 261 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 HMGCS1Q01581 520 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 CAV1Q03135 178 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 EXOSC7Q15024 291 aaKnown RBP16.93■□□□□ 0.3
NME3-204ENST00000563498 GRAMD2AQ8IUY3 354 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 METTL4Q8N3J2 472 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 OR52B6Q8NGF0 335 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 ATP6V1E2Q96A05 226 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 CDK15Q96Q40 435 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 ZNF226Q9NYT6 803 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 CPSF2Q9P2I0 782 aaKnown RBP16.93■□□□□ 0.3
NME3-204ENST00000563498 PLLPQ9Y342 182 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 MED12Q93074 2177 aa16.93■□□□□ 0.3
NME3-204ENST00000563498 A0A096LPK6 155 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 HMX2A2RU54 273 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 DEFB108AA8MXU0 73 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 FPR1P21462 350 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 DEKP35659 375 aaKnown RBP16.92■□□□□ 0.3
NME3-204ENST00000563498 CPOXP36551 454 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 ARL1P40616 181 aaPredicted RBP16.92■□□□□ 0.3
NME3-204ENST00000563498 STARP49675 285 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 EMDP50402 254 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 CCNG1P51959 295 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 BCL2A1Q16548 175 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 MROH9Q5TGP6 573 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 OR2A2Q6IF42 318 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 GBP7Q8N8V2 638 aaPredicted RBP16.92■□□□□ 0.3
NME3-204ENST00000563498 SIMC1Q8NDZ2 872 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 RDH11Q8TC12 318 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 SLC35A4Q96G79 324 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 COL21A1Q96P44 957 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 BDH2Q9BUT1 245 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 KCNF1Q9H3M0 494 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 EHD3Q9NZN3 535 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 PSME2Q9UL46 239 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 GPR55Q9Y2T6 319 aaPredicted RBP16.92■□□□□ 0.3
NME3-204ENST00000563498 WIF1Q9Y5W5 379 aa16.92■□□□□ 0.3
NME3-204ENST00000563498 MED12LQ86YW9 2145 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 JMJD1CQ15652 2540 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 H7C1Q1 480 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 SIAH2O43255 324 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 RAD51CO43502 376 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 ERAL1O75616 437 aaKnown RBP16.91■□□□□ 0.3
NME3-204ENST00000563498 TGM6O95932 706 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 FEN1P39748 380 aaKnown RBP16.91■□□□□ 0.3
NME3-204ENST00000563498 PLTPP55058 493 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 PSPHP78330 225 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 FAM27E3Q08E93 113 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 IFT88Q13099 833 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 TRAF3Q13114 568 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 ACKR1Q16570 336 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 GGTA1PQ4G0N0 100 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 TTC19Q6DKK2 380 aaPredicted RBP16.91■□□□□ 0.3
NME3-204ENST00000563498 PLXDC2Q6UX71 529 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 COMMD6Q7Z4G1 85 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 PRIMA1Q86XR5 153 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 CIARTQ8N365 385 aaPredicted RBP16.91■□□□□ 0.3
NME3-204ENST00000563498 PTGR2Q8N8N7 351 aaPredicted RBP16.91■□□□□ 0.3
NME3-204ENST00000563498 OR52R1Q8NGF1 315 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 STARD4Q96DR4 205 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 SFXN2Q96NB2 322 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 WFIKKN1Q96NZ8 548 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 C6orf203Q9P0P8 240 aaPredicted RBP16.91■□□□□ 0.3
NME3-204ENST00000563498 FBXL2Q9UKC9 423 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 TMCO1Q9UM00 188 aa16.91■□□□□ 0.3
NME3-204ENST00000563498 STX16-NPEPL1H3BU86 382 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 STX16O14662 325 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 CRYGSP22914 178 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 CD79BP40259 229 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 GUCY2DQ02846 1103 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 TRMT12Q53H54 448 aaKnown RBP16.9■□□□□ 0.3
NME3-204ENST00000563498 TECRLQ5HYJ1 363 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 CCDC25Q86WR0 208 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms