RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 RBM18Q96H35 190 aaKnown RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 PIWIL1Q96J94 861 aaKnown RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 MCCC1Q96RQ3 725 aaPredicted RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 NACA2Q9H009 215 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 C1orf21Q9H246 121 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 ESM1Q9NQ30 184 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 GPR83Q9NYM4 423 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 FZR1Q9UM11 496 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 A0A0J9YVX5 310 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 SAP18O00422 153 aaKnown RBP4.29□□□□□ -1.72
LINC00557-201ENST00000563184 IMPA2O14732 288 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 SSX5O60225 188 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 NUDT14O95848 222 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 PIGRP01833 764 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 GSTA1P08263 222 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 RALAP11233 206 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 CAMLGP49069 296 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 POU3F4P49335 361 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 ARHGDIAP52565 204 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 BPIFB3P59826 476 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 SMC1AQ14683 1233 aaKnown RBP4.29□□□□□ -1.72
LINC00557-201ENST00000563184 CEBPEQ15744 281 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 RBM43Q6ZSC3 357 aaKnown RBP4.29□□□□□ -1.72
LINC00557-201ENST00000563184 PAQR9Q6ZVX9 377 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 TYMSOSQ8TAI1 123 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 ZNF671Q8TAW3 534 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 NMNAT2Q9BZQ4 307 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 FAM114A2Q9NRY5 505 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 BCAP29Q9UHQ4 241 aa4.29□□□□□ -1.72
LINC00557-201ENST00000563184 ZNF490Q9ULM2 529 aaPredicted RBP4.29□□□□□ -1.72
LINC00557-201ENST00000563184 A0A1W2PQ72 361 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 LRIT2A6NDA9 550 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 SRPX2O60687 465 aaPredicted RBP4.28□□□□□ -1.72
LINC00557-201ENST00000563184 SDC3O75056 442 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 IGSF6O95976 241 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 PTPN6P29350 595 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 BRCC3P46736 316 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 SPP2Q13103 211 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 CRMP1Q14194 572 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 PARP6Q2NL67 630 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 CNPY1Q3B7I2 92 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 MS4A13Q5J8X5 152 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 LDLRAP1Q5SW96 308 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 RNLSQ5VYX0 342 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 SPINK14Q6IE38 97 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 ZNF600Q6ZNG1 722 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 HPS6Q86YV9 775 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 CCDC36Q8IYA8 594 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 FAM71CQ8NEG0 241 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 TBCKQ8TEA7 893 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 AGAP11Q8TF27 550 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 SLC25A36Q96CQ1 311 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 TSPAN18Q96SJ8 248 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 TRIM9Q9C026 710 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 RAI14Q9P0K7 980 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 MMP24Q9Y5R2 645 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 CLCA3PQ9Y6N3 262 aa4.28□□□□□ -1.72
LINC00557-201ENST00000563184 AGRNO00468 2067 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 COL2A1P02458 1487 aaPredicted RBP4.27□□□□□ -1.73
LINC00557-201ENST00000563184 MFSD2BA6NFX1 497 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 E9PMD0 336 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 SGK494L7N484 410 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 RASGRF2O14827 1237 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 TYROBPO43914 113 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 SRSF10O75494 262 aaKnown RBP4.27□□□□□ -1.73
LINC00557-201ENST00000563184 STAM2O75886 525 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 NDUFA7O95182 113 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 SNRPCP09234 159 aaKnown RBP4.27□□□□□ -1.73
LINC00557-201ENST00000563184 DNAJB1P25685 340 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 IST1P53990 364 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 HMGCS2P54868 508 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 ZNF239Q16600 458 aaKnown RBP4.27□□□□□ -1.73
LINC00557-201ENST00000563184 SLC22A6Q4U2R8 563 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 IRGCQ6NXR0 463 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 LEG1Q6P5S2 330 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 MARCH9Q86YJ5 346 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 NAXDQ8IW45 347 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 LYG1Q8N1E2 194 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 SLC39A11Q8N1S5 342 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 OR52J3Q8NH60 311 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 FNDC8Q8TC99 324 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 MCHR2Q969V1 340 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 NCLNQ969V3 563 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 C11orf24Q96F05 449 aaPredicted RBP4.27□□□□□ -1.73
LINC00557-201ENST00000563184 KCNK16Q96T55 309 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 WRAP53Q9BUR4 548 aaKnown RBP4.27□□□□□ -1.73
LINC00557-201ENST00000563184 KRT23Q9C075 422 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 RAB17Q9H0T7 212 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 ROPN1Q9HAT0 212 aaPredicted RBP4.27□□□□□ -1.73
LINC00557-201ENST00000563184 NGBQ9NPG2 151 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 P2RX2Q9UBL9 471 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 RNF115Q9Y4L5 304 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 FKBP7Q9Y680 259 aa4.27□□□□□ -1.73
LINC00557-201ENST00000563184 RNF222A6NCQ9 220 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 TRIM49BA6NDI0 452 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 TRABD2BA6NFA1 517 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 ERI2A8K979 691 aaKnown RBP4.26□□□□□ -1.73
LINC00557-201ENST00000563184 PVRP15151 417 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 IGFBP5P24593 272 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms