RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HOXB9P17482 250 aaPredicted RBP12.37□□□□□ -0.43
CDH1-204ENST00000562118 ABCD3P28288 659 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 PTPN6P29350 595 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 MAN2A2P49641 1150 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 NR0B1P51843 470 aaKnown RBP12.37□□□□□ -0.43
CDH1-204ENST00000562118 ZNF766Q5HY98 468 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 NXNQ6DKJ4 435 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 MFSD12Q6NUT3 480 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 RTL4Q6ZR62 310 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 MDGA2Q7Z553 956 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 TAGAPQ8N103 731 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 CYP4Z2PQ8N1L4 340 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 MIER2Q8N344 545 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 TMEM156Q8N614 296 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 CPSF7Q8N684 471 aaKnown RBP12.37□□□□□ -0.43
CDH1-204ENST00000562118 MIPOL1Q8TD10 442 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 ASB15Q8WXK1 588 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 HGDQ93099 445 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 MOAP1Q96BY2 351 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 MARK4Q96L34 752 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 TAAR6Q96RI8 345 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 PROK2Q9HC23 129 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 DDX18Q9NVP1 670 aaKnown RBP12.37□□□□□ -0.43
CDH1-204ENST00000562118 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 BCAP29Q9UHQ4 241 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 NPFFR2Q9Y5X5 522 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 GMEB1Q9Y692 573 aa12.37□□□□□ -0.43
CDH1-204ENST00000562118 FAM234BA2RU67 622 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 OR6C70A6NIJ9 312 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 A8MVJ9 347 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 PPM1BO75688 479 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 F10P00742 488 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 ABCB1P08183 1280 aaPredicted RBP12.36□□□□□ -0.43
CDH1-204ENST00000562118 CD46P15529 392 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 CORO7P57737 925 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 SQLEQ14534 574 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 RPS6KA2Q15349 733 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 CYP27C1Q4G0S4 372 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 SLC25A25Q6KCM7 469 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 CLECL1Q8IZS7 167 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 SLC34A3Q8N130 599 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 FBXW8Q8N3Y1 598 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 CDRT4Q8N9R6 151 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 ZFP62Q8NB50 900 aaPredicted RBP12.36□□□□□ -0.43
CDH1-204ENST00000562118 TMEM178AQ8NBL3 297 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 PSD4Q8NDX1 1056 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 NUP43Q8NFH3 380 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 OR9I1Q8NGQ6 314 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 FAM110BQ8TC76 370 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 C10orf82Q8WW14 230 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 MFRPQ9BY79 579 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 HES7Q9BYE0 225 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 DEPPQ9NTK1 212 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 HPF1Q9NWY4 346 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 ANKRD10Q9NXR5 420 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 CNOT11Q9UKZ1 510 aaKnown RBP12.36□□□□□ -0.43
CDH1-204ENST00000562118 NTNG1Q9Y2I2 539 aa12.36□□□□□ -0.43
CDH1-204ENST00000562118 HELZ2Q9BYK8 2649 aaKnown RBP12.36□□□□□ -0.43
CDH1-204ENST00000562118 TENM4Q6N022 2769 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 ZCCHC18P0CG32 403 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 TROVE2P10155 538 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH1-204ENST00000562118 EFNA1P20827 205 aaPredicted RBP12.35□□□□□ -0.43
CDH1-204ENST00000562118 S100A3P33764 101 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 GPC1P35052 558 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 TMED10P49755 219 aaKnown RBP12.35□□□□□ -0.43
CDH1-204ENST00000562118 POLR2JP52435 117 aaKnown RBP12.35□□□□□ -0.43
CDH1-204ENST00000562118 DGKQP52824 942 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 NRG3P56975 720 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 PRR5P85299 388 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 C19orf57Q0VDD7 668 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 GAB1Q13480 694 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 HYAL4Q2M3T9 481 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 PGS1Q32NB8 556 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 PAOXQ6QHF9 649 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 OR56A1Q8NGH5 318 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 DNAJB8Q8NHS0 232 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 SPPL2AQ8TCT8 520 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 MIB2Q96AX9 1013 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
CDH1-204ENST00000562118 CHMP6Q96FZ7 201 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 FRMD6Q96NE9 622 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 STACQ99469 402 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 SLX1AQ9BQ83 275 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 TMEM120AQ9BXJ8 343 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH1-204ENST00000562118 C3orf14Q9HBI5 128 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 TIMMDC1Q9NPL8 285 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 DUSP22Q9NRW4 184 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 DCTN4Q9UJW0 460 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 KLF13Q9Y2Y9 288 aaPredicted RBP12.35□□□□□ -0.43
CDH1-204ENST00000562118 FLNCQ14315 2725 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 NCKAP5O14513 1909 aa12.35□□□□□ -0.43
CDH1-204ENST00000562118 A0A0G2JND7 137 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 CAPN14A8MX76 684 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 ABCB7O75027 752 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 NME6O75414 186 aaPredicted RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 GLSO94925 669 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms