RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 OR5AU1Q8NGC0 362 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 OR4K14Q8NGD5 310 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 OR51G2Q8NGK0 314 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 OR1J1Q8NGS3 322 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ANGPTL6Q8NI99 470 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 RHEBL1Q8TAI7 183 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NDNFQ8TB73 568 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ACMSDQ8TDX5 336 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PHLDA1Q8WV24 401 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 SCFD1Q8WVM8 642 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SMPDL3AQ92484 453 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PIGCQ92535 297 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 RPL3LQ92901 407 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 RAB1CQ92928 201 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ADIPOR1Q96A54 375 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PNPLA2Q96AD5 504 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 DACT3Q96B18 629 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 TMIGD2Q96BF3 282 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 LRRC45Q96CN5 670 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CXorf40BQ96DE9 158 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NUS1Q96E22 293 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ABHD8Q96I13 439 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SERAC1Q96JX3 654 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 RITA1Q96K30 269 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 C8orf76Q96K31 380 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 C3orf30Q96M34 536 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 IL4I1Q96RQ9 567 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 TGS1Q96RS0 853 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 CDCA3Q99618 268 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 RTP3Q9BQQ7 232 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 BBS2Q9BXC9 721 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NUSAP1Q9BXS6 441 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 PARD6BQ9BYG5 372 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 MFFQ9GZY8 342 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SAV1Q9H4B6 383 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 ELOVL6Q9H5J4 265 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 C5orf66Q9H5L9 145 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 BICC1Q9H694 974 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 PSTPIP2Q9H939 334 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CLK4Q9HAZ1 481 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 VCX3AQ9NNX9 186 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 RAB18Q9NP72 206 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 FZD3Q9NPG1 666 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 IL26Q9NPH9 171 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 FGF21Q9NSA1 209 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SEMA4GQ9NTN9 838 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ASB6Q9NWX5 421 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 DUS2Q9NX74 493 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 SYBUQ9NX95 663 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PPP4R1LQ9P1A2 415 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 KLHL9Q9P2J3 617 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SLC17A6Q9P2U8 582 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 EIF3KQ9UBQ5 218 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 PISDQ9UG56 409 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 POU2F3Q9UKI9 436 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 MAN1B1Q9UKM7 699 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 IKZF3Q9UKT9 509 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NPIPA1Q9UND3 350 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 GSTK1Q9Y2Q3 226 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SLC6A5Q9Y345 797 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PCDHAC2Q9Y5I4 1007 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 HS3ST3A1Q9Y663 406 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ERCC6Q03468 1493 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 GAKO14976 1311 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 AFF2P51816 1311 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PHLPP2Q6ZVD8 1323 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 MYO3BQ8WXR4 1341 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SBNO1A3KN83 1393 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 HEG1Q9ULI3 1381 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 CARMIL2Q6F5E8 1435 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 KIF27Q86VH2 1401 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 A0A0G2JLL6 359 aaPredicted RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 GOLGA8QA0A0J9YX86 632 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ATP6AP2A0A1C7CYW4 349 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 A0A1W2PNV4 684 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 SCO2A0A1W2PP80 73 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 RNF222A6NCQ9 220 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 SMIM23A6NLE4 172 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 CENPXA8MT69 81 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 H3BMH7 237 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 TEX46H3BTG2 121 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 NR5A2O00482 541 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 MATN3O15232 486 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 CLOCKO15516 846 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 PSTPIP1O43586 416 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 CALUO43852 315 aaPredicted RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 SH3BGRLO75368 114 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 UPK3AO75631 287 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 OR2J3O76001 311 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 GAGE7O76087 117 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 STK17BO94768 372 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ERLIN2O94905 339 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 DIRAS1O95057 198 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ESRRBO95718 433 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 CLPTM1O96005 669 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 GOT2P00505 430 aaKnown RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 ITGB2P05107 769 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 GAGE12FP0CL80 117 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 GAGE12GP0CL81 117 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 GAGE12IP0CL82 117 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms