RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 DUSP5Q16690 384 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 ATAD3BQ5T9A4 648 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 NDUFAF7Q7L592 441 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 SLC29A4Q7RTT9 530 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 C16orf62Q7Z3J2 963 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 MRGPREQ86SM8 312 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 SERPINA11Q86U17 422 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 CALHM3Q86XJ0 350 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 MICU2Q8IYU8 434 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 CDRT4Q8N9R6 151 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 SLC16A11Q8NCK7 471 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 NFAM1Q8NET5 270 aaPredicted RBP9.69□□□□□ -0.86
TPM1-221ENST00000559831 NFKBIDQ8NI38 313 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 MIPOL1Q8TD10 442 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 GPR151Q8TDV0 419 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 KCNE4Q8WWG9 221 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 CDS1Q92903 461 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 UTP4Q969X6 686 aaKnown RBP9.69□□□□□ -0.86
TPM1-221ENST00000559831 SLC35A4Q96G79 324 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 REXO5Q96IC2 774 aaKnown RBP9.69□□□□□ -0.86
TPM1-221ENST00000559831 VPS50Q96JG6 964 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 VSTM2LQ96N03 204 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 EFHD1Q9BUP0 239 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 SPATA9Q9BWV2 254 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 FAM117AQ9C073 453 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 PCDHAC1Q9H158 963 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 MMADHCQ9H3L0 296 aaPredicted RBP9.69□□□□□ -0.86
TPM1-221ENST00000559831 ZNF160Q9HCG1 818 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 EGFL7Q9UHF1 273 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 FBXL4Q9UKA2 621 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 GMEB1Q9Y692 573 aa9.69□□□□□ -0.86
TPM1-221ENST00000559831 DOCK10Q96BY6 2186 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 EXPH5Q8NEV8 1989 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 SPTBN4Q9H254 2564 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 C2orf92A0A1B0GVN3 265 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 GXYLT2A0PJZ3 443 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 ELOVL7A1L3X0 281 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 DUXAA6NLW8 204 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 OR6C76A6NM76 312 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 C5orf58C9J3I9 102 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 PRKNO60260 465 aaPredicted RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 STAMBPO95630 424 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 BCHEP06276 602 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 CELA2AP08217 269 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 ARAFP10398 606 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 NR2F1P10589 423 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 NCK1P16333 377 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 MAGEA8P43361 318 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 RFX3P48380 749 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 MAN2A2P49641 1150 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 CLCN2P51788 898 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 GPR143P51810 404 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 CORO7P57737 925 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 TXNL4AP83876 142 aaKnown RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 CDK6Q00534 326 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 BNIP2Q12982 314 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 SCARB2Q14108 478 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 ADRM1Q16186 407 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 EXT1Q16394 746 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 VMACQ2NL98 169 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 SPATS1Q496A3 300 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 GPAT3Q53EU6 434 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 ERICH5Q6P6B1 374 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 PGM2L1Q6PCE3 622 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 ZCCHC12Q6PEW1 402 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 NPSR1Q6W5P4 371 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 HSDL2Q6YN16 418 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 OLIG3Q7RTU3 272 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 NET1Q7Z628 596 aaPredicted RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 PTOV1Q86YD1 416 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 C9orf40Q8IXQ3 194 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 LGI4Q8N135 537 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 COX18Q8N8Q8 333 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 C11orf65Q8NCR3 313 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 TNIP2Q8NFZ5 429 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 THAP3Q8WTV1 239 aaPredicted RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 FIG4Q92562 907 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 PIK3R3Q92569 461 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 FGF11Q92914 225 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 LMF2Q9BU23 707 aaKnown RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 SEMA4CQ9C0C4 833 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 WWTR1Q9GZV5 400 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 PIGUQ9H490 435 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 LIN28AQ9H9Z2 209 aaKnown RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 EXD2Q9NVH0 621 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 THUMPD1Q9NXG2 353 aaKnown RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 P4HTMQ9NXG6 502 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 P2RX2Q9UBL9 471 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 SUCOQ9UBS9 1254 aaKnown RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 SLC7A8Q9UHI5 535 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 ZNF223Q9UK11 482 aaPredicted RBP9.68□□□□□ -0.86
TPM1-221ENST00000559831 OR10H1Q9Y4A9 318 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 KCNE3Q9Y6H6 103 aa9.68□□□□□ -0.86
TPM1-221ENST00000559831 A8MVJ9 347 aa9.67□□□□□ -0.86
TPM1-221ENST00000559831 CXCR6O00574 342 aa9.67□□□□□ -0.86
TPM1-221ENST00000559831 ARPC2O15144 300 aa9.67□□□□□ -0.86
TPM1-221ENST00000559831 KLK10O43240 276 aa9.67□□□□□ -0.86
TPM1-221ENST00000559831 ASNA1O43681 348 aa9.67□□□□□ -0.86
TPM1-221ENST00000559831 TLX3O43711 291 aaPredicted RBP9.67□□□□□ -0.86
TPM1-221ENST00000559831 GMNNO75496 209 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms