RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 LINC00854A0A1B0GVQ3 168 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 FAM170BA6NMN3 283 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 H3BQ06 376 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 RAB36O95755 333 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 CH25HO95992 272 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 ENDOUP21128 410 aaKnown RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 PSMA1P25786 263 aaKnown RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TRHRP34981 398 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 RNF144AP50876 292 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 CLDN2P57739 230 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 CDK5Q00535 292 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 C22orf42Q6IC83 251 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SLC48A1Q6P1K1 146 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SHISA5Q8N114 240 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 FAM26EQ8N5C1 309 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 KCT2Q8NC54 265 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 PROKR2Q8NFJ6 384 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 OR2L5Q8NG80 312 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 OR14C36Q8NHC7 312 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SLC9A6Q92581 669 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 RNFT2Q96EX2 444 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SAP130Q9H0E3 1048 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SLC38A1Q9H2H9 487 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TOR4AQ9NXH8 423 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TESQ9UGI8 421 aaKnown RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 MKLN1Q9UL63 735 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D24Q9ULP9 559 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SPIN1Q9Y657 262 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 DNAH14Q0VDD8 3507 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 A0A075B6Q4 140 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 HYKKA2RU49 373 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 ISM1B1AKI9 464 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF670-ZNF695F2Z2N8 137 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 CACNB4O00305 520 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SLC31A1O15431 190 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 FCMRO60667 390 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 FHP07954 510 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 CSNK2A2P19784 350 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 RPS25P62851 125 aaKnown RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 BTN3A2P78410 334 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 MLLT11Q13015 90 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SGCGQ13326 291 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 KCNJ8Q15842 424 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 C6orf132Q5T0Z8 1188 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TMEM64Q6YI46 380 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 AKAP14Q86UN6 197 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 ZFP41Q8N8Y5 198 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SYT14Q8NB59 555 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TTLQ8NG68 377 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 OR4E2Q8NGC2 313 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 GATAD2BQ8WXI9 593 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TXNDC15Q96J42 360 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TIMM29Q9BSF4 260 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 RPP25Q9BUL9 199 aaKnown RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SPATA5L1Q9BVQ7 753 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 PINK1Q9BXM7 581 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 RACGAP1Q9H0H5 632 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TXNL4BQ9NX01 149 aaKnown RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 KLHL3Q9UH77 587 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 IL20RAQ9UHF4 553 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 DIMT1Q9UNQ2 313 aaKnown RBP9.43□□□□□ -0.9
LRRC28-216ENST00000559819 CA5BQ9Y2D0 317 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 V9GYH0 126 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 SNRNP200O75643 2136 aaKnown RBP9.42□□□□□ -0.9
LRRC28-216ENST00000559819 A0A0G2JPF8 293 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 HNRNPCL2B2RXH8 293 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 HNRNPCL3B7ZW38 293 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 BTN3A3O00478 584 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 PIP5K1CO60331 668 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 RNGTTO60942 597 aaKnown RBP9.42□□□□□ -0.9
LRRC28-216ENST00000559819 DNAJB6O75190 326 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 ALPPP05187 535 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 ASGR2P07307 311 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 HNRNPCL4P0DMR1 293 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 C5AR1P21730 350 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 CASP3P42574 277 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 PDX1P52945 283 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 EFNB1P98172 346 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 DBPQ10586 325 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-216ENST00000559819 COX10Q12887 443 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 BAK1Q16611 211 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 LRIT3Q3SXY7 679 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 ENTPD8Q5MY95 495 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 FAM111BQ6SJ93 734 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 CD300LDQ6UXZ3 194 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 NKAIN4Q8IVV8 208 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 OR4N5Q8IXE1 308 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 YAF2Q8IY57 180 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 OR56A1Q8NGH5 318 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 SFXN5Q8TD22 340 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 TM9SF4Q92544 642 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 PIK3R3Q92569 461 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 ELP4Q96EB1 424 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 NEDD4LQ96PU5 975 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 NELL2Q99435 816 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 SLC17A9Q9BYT1 436 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 FGF22Q9HCT0 170 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 CRNNQ9UBG3 495 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms