RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MVDP53602 400 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 ZNF155Q12901 538 aaPredicted RBP10.05□□□□□ -0.8
TPM1-217ENST00000559108 KLF10Q13118 480 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 RPS6KA2Q15349 733 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 DUSP5Q16690 384 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 ZNF791Q3KP31 576 aaPredicted RBP10.05□□□□□ -0.8
TPM1-217ENST00000559108 PLEKHN1Q494U1 663 aaPredicted RBP10.05□□□□□ -0.8
TPM1-217ENST00000559108 BICRALQ6AI39 1079 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 Q6ZS92 163 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 GLB1L3Q8NCI6 653 aaPredicted RBP10.05□□□□□ -0.8
TPM1-217ENST00000559108 SLC16A11Q8NCK7 471 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 NUP43Q8NFH3 380 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 OR5D16Q8NGK9 328 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 OR4A15Q8NGL6 344 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 ZFP28Q8NHY6 868 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 PIK3R3Q92569 461 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 GTF2H4Q92759 462 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 ERP27Q96DN0 273 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 WBP1Q96G27 269 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 ZNF354BQ96LW1 612 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 LMF2Q9BU23 707 aaKnown RBP10.05□□□□□ -0.8
TPM1-217ENST00000559108 TRIM8Q9BZR9 551 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 RNF32Q9H0A6 362 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 SLC25A18Q9H1K4 315 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 MYLK2Q9H1R3 596 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 IKZF5Q9H5V7 419 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 PROK2Q9HC23 129 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 SH2D2AQ9NP31 389 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 DEPPQ9NTK1 212 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 ZCCHC3Q9NUD5 404 aaKnown RBP10.05□□□□□ -0.8
TPM1-217ENST00000559108 ATAD3AQ9NVI7 634 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 BTNL2Q9UIR0 455 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 NTNG1Q9Y2I2 539 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 SNX8Q9Y5X2 465 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 COL6A6A6NMZ7 2263 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 FAM208BQ5VWN6 2430 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 NINQ8N4C6 2090 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 RNF103-CHMP3A0A140T963 221 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 CFLARO15519 480 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 EMC8O43402 210 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 ERN1O75460 977 aaKnown RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 SORBS2O94875 1100 aaKnown RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 ZIC2O95409 532 aaPredicted RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 HMGN2P05204 90 aaKnown RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 FBXO45P0C2W1 286 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 CCL3P10147 92 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 DRD5P21918 477 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 ABCD3P28288 659 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 SOAT1P35610 550 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 PPICP45877 212 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 CCT3P49368 545 aaKnown RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 HLCSP50747 726 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 SSR4P51571 173 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 PRKAG1P54619 331 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 FBXW4P57775 412 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 PMP22Q01453 160 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 FUT5Q11128 374 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 TP53BP2Q13625 1128 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 LASP1Q14847 261 aaKnown RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 OR1C1Q15619 314 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 DPY19L1Q2PZI1 675 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 COX20Q5RI15 118 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 IRAK1BP1Q5VVH5 260 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 METTL21CQ5VZV1 264 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 SAXO2Q658L1 398 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 SLC29A4Q7RTT9 530 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 SZRD1Q7Z422 152 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 GALNT10Q86SR1 603 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 LSRQ86X29 649 aaPredicted RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 OR10G3Q8NGC4 313 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 PNPT1Q8TCS8 783 aaKnown RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 HAS2Q92819 552 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 HGDQ93099 445 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 TMBIM1Q969X1 311 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 NTNG2Q96CW9 530 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 MS4A4EQ96PG1 132 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 TAAR6Q96RI8 345 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 CCT8L2Q96SF2 557 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 PRPF18Q99633 342 aaKnown RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 CCDC106Q9BWC9 280 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 RTN4RQ9BZR6 473 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 EPN3Q9H201 632 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 YARS2Q9Y2Z4 477 aaKnown RBP10.04□□□□□ -0.8
TPM1-217ENST00000559108 ZNF451Q9Y4E5 1061 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 KALRNO60229 2985 aa10.04□□□□□ -0.8
TPM1-217ENST00000559108 FRG2CA6NGY1 282 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 CCDC154A6NI56 674 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 G3V3Y1 287 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 FXYD1O00168 92 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 TO15178 435 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 DYRK3O43781 588 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 TSPAN2O60636 221 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 UGT2B11O75310 529 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 SLITRK5O94991 958 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 NKX2-2O95096 273 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 IL6P05231 212 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 PTGDSP41222 190 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 STX1BP61266 288 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 ARG2P78540 354 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms