RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 OTUB1Q96FW1 271 aaPredicted RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 IMMP1LQ96LU5 166 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 OR7D2Q96RA2 312 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 TMEM38AQ9H6F2 299 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 THUMPD1Q9NXG2 353 aaKnown RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 DTX4Q9Y2E6 619 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 FREM2Q5SZK8 3169 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 ELOVL7A1L3X0 281 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 DUXAA6NLW8 204 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 ACP2P11117 423 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 NDUFAF7Q7L592 441 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 MICU2Q8IYU8 434 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 AMER2Q8N7J2 671 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 ADAMTS17Q8TE56 1095 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 ADAMTS15Q8TE58 950 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 XAGE5Q8WWM1 108 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 SLC9A6Q92581 669 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 MAL2Q969L2 176 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 CCDC124Q96CT7 223 aaKnown RBP16.79■□□□□ 0.28
CLPX-203ENST00000558958 SLC35A4Q96G79 324 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 STACQ99469 402 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 LMF2Q9BU23 707 aaKnown RBP16.79■□□□□ 0.28
CLPX-203ENST00000558958 EFHD1Q9BUP0 239 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 GIN1Q9NXP7 522 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 SUCOQ9UBS9 1254 aaKnown RBP16.79■□□□□ 0.28
CLPX-203ENST00000558958 CFL2Q9Y281 166 aa16.79■□□□□ 0.28
CLPX-203ENST00000558958 OR6C76A6NM76 312 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 SOX30O94993 753 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 AGR2O95994 175 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 ALOX5P09917 674 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 ARAFP10398 606 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 PSG6Q00889 435 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 RBBP4Q09028 425 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 BNIP2Q12982 314 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 CLN3Q13286 438 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 TRIM25Q14258 630 aaKnown RBP16.78■□□□□ 0.28
CLPX-203ENST00000558958 MYBPC3Q14896 1274 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 DUSP5Q16690 384 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 VMACQ2NL98 169 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 ERICH5Q6P6B1 374 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 MRGPREQ86SM8 312 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 VASH2Q86V25 355 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 PTRH1Q86Y79 214 aaKnown RBP16.78■□□□□ 0.28
CLPX-203ENST00000558958 RAB43Q86YS6 212 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 C9orf40Q8IXQ3 194 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 C11orf65Q8NCR3 313 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 TNIP2Q8NFZ5 429 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 FGF11Q92914 225 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 VMP1Q96GC9 406 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 ITPAQ9BY32 194 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 PCDHAC1Q9H158 963 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 PIGUQ9H490 435 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 A4GALTQ9NPC4 353 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 DUSP22Q9NRW4 184 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 ZNF223Q9UK11 482 aaPredicted RBP16.78■□□□□ 0.28
CLPX-203ENST00000558958 POMPQ9Y244 141 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 KCNE3Q9Y6H6 103 aa16.78■□□□□ 0.28
CLPX-203ENST00000558958 NSG1A0A0A6YYJ2 146 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 PRAMEF27A3QJZ7 478 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 TTC36A6NLP5 189 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 NKX2-2O95096 273 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 TFPTP0C1Z6 253 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 SOX11P35716 441 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 MS4A2Q01362 244 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 EBPQ15125 230 aaKnown RBP16.77■□□□□ 0.28
CLPX-203ENST00000558958 ZNHIT3Q15649 155 aaPredicted RBP16.77■□□□□ 0.28
CLPX-203ENST00000558958 EXT1Q16394 746 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 ZNF630Q2M218 657 aaPredicted RBP16.77■□□□□ 0.28
CLPX-203ENST00000558958 PLAG1Q6DJT9 500 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 ASB9Q96DX5 294 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 VPS50Q96JG6 964 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 BTBD9Q96Q07 612 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 P4HTMQ9NXG6 502 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 EGFL7Q9UHF1 273 aa16.77■□□□□ 0.28
CLPX-203ENST00000558958 GPR55Q9Y2T6 319 aaPredicted RBP16.77■□□□□ 0.28
CLPX-203ENST00000558958 ACOT8O14734 319 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 HPP00738 406 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 ADRB1P08588 477 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 CT45A8P0DMV1 189 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 CT45A9P0DMV2 189 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 PCGF2P35227 344 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 PPICP45877 212 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 CORO7P57737 925 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 VEZF1Q14119 521 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 MAPK11Q15759 364 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 CT45A2Q5DJT8 189 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 HEPHL1Q6MZM0 1159 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 NPSR1Q6W5P4 371 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 HSDL2Q6YN16 418 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 SLC29A4Q7RTT9 530 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 ZSCAN1Q8NBB4 408 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 OR8K3Q8NH51 312 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 M1APQ8TC57 530 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 GPR151Q8TDV0 419 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 ELP5Q8TE02 316 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 SLC38A5Q8WUX1 472 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 CDS1Q92903 461 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 ADIPOR1Q96A54 375 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 IP6K3Q96PC2 410 aa16.76■□□□□ 0.27
CLPX-203ENST00000558958 WWTR1Q9GZV5 400 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms