RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 FAM221AA4D161 298 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 PRAMEF25A6NGN4 478 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 GOLGA6L10A6NI86 522 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 G3V2L1 256 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 TSPAN2O60636 221 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 SNX4O95219 450 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 PYGBP11216 843 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 TCEA1P23193 301 aaKnown RBP12.33□□□□□ -0.44
VPS18-203ENST00000558855 ATP5F1P24539 256 aaPredicted RBP12.33□□□□□ -0.44
VPS18-203ENST00000558855 UQCRC1P31930 480 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 DEKP35659 375 aaKnown RBP12.33□□□□□ -0.44
VPS18-203ENST00000558855 TMED10P49755 219 aaKnown RBP12.33□□□□□ -0.44
VPS18-203ENST00000558855 ART1P52961 327 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 PRKAA2P54646 552 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 NRG3P56975 720 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 BTKQ06187 659 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 CSTF3Q12996 717 aaKnown RBP12.33□□□□□ -0.44
VPS18-203ENST00000558855 SLC29A2Q14542 456 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 RASA2Q15283 850 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 C10orf62Q5T681 223 aaPredicted RBP12.33□□□□□ -0.44
VPS18-203ENST00000558855 NSUN5P2Q63ZY6 315 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 TMEM81Q6P7N7 255 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 SH2D5Q6ZV89 423 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 PACS2Q86VP3 889 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 CLYBLQ8N0X4 340 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 OR1J4Q8NGS1 313 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 ZNF675Q8TD23 568 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 RNF138Q8WVD3 245 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 L3HYPDHQ96EM0 354 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 VSTM2LQ96N03 204 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 TUBA1CQ9BQE3 449 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 OR2B2Q9GZK3 357 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 DNAJB12Q9NXW2 375 aaKnown RBP12.33□□□□□ -0.44
VPS18-203ENST00000558855 TBK1Q9UHD2 729 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 CBLCQ9ULV8 474 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 PTGDR2Q9Y5Y4 395 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 C2CD3Q4AC94 2353 aa12.33□□□□□ -0.44
VPS18-203ENST00000558855 MBD3L4A6NDZ8 208 aaPredicted RBP12.32□□□□□ -0.44
VPS18-203ENST00000558855 MBD3L3A6NE82 208 aaPredicted RBP12.32□□□□□ -0.44
VPS18-203ENST00000558855 FRG2CA6NGY1 282 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 MBD3L5A6NJ08 208 aaPredicted RBP12.32□□□□□ -0.44
VPS18-203ENST00000558855 HSPB2A8KAH6 182 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 CAPN14A8MX76 684 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 AHRRA9YTQ3 701 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 SYT5O00445 386 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 TO15178 435 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 ZWINTO95229 277 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 ESRRBO95718 433 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 SHBGP04278 402 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 RHOXF2BP0C7M4 288 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 NAGAP17050 411 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 IMPDH1P20839 514 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 DRD5P21918 477 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 TIA1P31483 386 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS18-203ENST00000558855 TIMP3P35625 211 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 PPICP45877 212 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 STARP49675 285 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 ASCL1P50553 236 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 GAS1P54826 345 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 TRA2BP62995 288 aaKnown RBP12.32□□□□□ -0.44
VPS18-203ENST00000558855 HSPB2Q16082 182 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 FBXL19-AS1Q494R0 122 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 GLE1Q53GS7 698 aaKnown RBP12.32□□□□□ -0.44
VPS18-203ENST00000558855 C6orf163Q5TEZ5 329 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 OR5M10Q6IEU7 315 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 NUP54Q7Z3B4 507 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 LACC1Q8IV20 430 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 MBD3L2Q8NHZ7 208 aaPredicted RBP12.32□□□□□ -0.44
VPS18-203ENST00000558855 METTL6Q8TCB7 284 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 ABTB1Q969K4 478 aaPredicted RBP12.32□□□□□ -0.44
VPS18-203ENST00000558855 HSPBAP1Q96EW2 488 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 BTBD9Q96Q07 612 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 RHOXF2Q9BQY4 288 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 FOLH1BQ9HBA9 442 aa12.32□□□□□ -0.44
VPS18-203ENST00000558855 CCM2LQ9NUG4 571 aaPredicted RBP12.32□□□□□ -0.44
VPS18-203ENST00000558855 A0A1W2PPR1 153 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 KRT6AP02538 564 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 KRT6BP04259 564 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 HSD3B1P14060 373 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 KRT15P19012 456 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 TACR1P25103 407 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 HSD3B2P26439 372 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 HMOX2P30519 316 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 KIR2DL3P43628 341 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 KRT6CP48668 564 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 GFRA1P56159 465 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 B3GALT5-AS1P59052 145 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 CEBPEQ15744 281 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 CES4AQ5XG92 561 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 SLC30A6Q6NXT4 461 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 ADGRE4PQ86SQ3 457 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.31□□□□□ -0.44
VPS18-203ENST00000558855 RNASE6Q93091 150 aaKnown RBP12.31□□□□□ -0.44
VPS18-203ENST00000558855 EFHD2Q96C19 240 aaPredicted RBP12.31□□□□□ -0.44
VPS18-203ENST00000558855 SLC35A4Q96G79 324 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 ADOQ96SZ5 270 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 SHCBP1LQ9BZQ2 653 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 TSPYL1Q9H0U9 437 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 PFDN4Q9NQP4 134 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 RASSF1Q9NS23 344 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms