RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 MBD2Q9UBB5 411 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 LIPT1Q9Y234 373 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 MEMO1Q9Y316 297 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 C2CD4DB7Z1M9 353 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 MYF5P13349 255 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 CHRFAM7AQ494W8 412 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 SHFQ7M4L6 423 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 ZNF572Q7Z3I7 529 aaPredicted RBP12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 YTHDF3Q7Z739 585 aaKnown RBP12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 FTMTQ8N4E7 242 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 ACOT4Q8N9L9 421 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 OR2L2Q8NH16 312 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 NXPE3Q969Y0 559 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 FUBP1Q96AE4 644 aaKnown RBP12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 ECHDC3Q96DC8 303 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 FAM71F1Q96KD3 344 aaPredicted RBP12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 DMRTB1Q96MA1 342 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 ACTRT3Q9BYD9 372 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 OR10A4Q9H209 315 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 PCDHB16Q9NRJ7 776 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 TM7SF3Q9NS93 570 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 ACTL6BO94805 426 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 C1SP09871 688 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 RTN4RL1Q86UN2 441 aaPredicted RBP12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 OR2A12Q8NGT7 310 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 SLC12A9Q9BXP2 914 aa12.97□□□□□ -0.33
SEMA6D-208ENST00000558014 DPPA5A6NC42 116 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 NUAK1O60285 661 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 ARL3P36405 182 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 NOVA1P51513 510 aaKnown RBP12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 ERVPABLB-1P60509 514 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 MANEALQ5VSG8 457 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 PAMR1Q6UXH9 720 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 LINC00471Q8N535 108 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 IFI44Q8TCB0 444 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 CDS1Q92903 461 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 SLC6A7Q99884 636 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 WDR12Q9GZL7 423 aaKnown RBP12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 ACTR6Q9GZN1 396 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 ACOX3O15254 700 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 FPR1P21462 350 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 HSD11B2P80365 405 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 RNF220Q5VTB9 566 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 MRPL21Q7Z2W9 205 aaKnown RBP12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 LRRC18Q8N456 261 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 TMEM80Q96HE8 168 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 FBXL20Q96IG2 436 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 EDEM2Q9BV94 578 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 FOLH1BQ9HBA9 442 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 UCKL1Q9NWZ5 548 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 IL17CQ9P0M4 197 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 ZNF850A8MQ14 1090 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 ZBTB42B2RXF5 422 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 PPP1R3DO95685 299 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 PNMTP11086 282 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 ENDOUP21128 410 aaKnown RBP12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 TFF2Q03403 129 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 HSF5Q4G112 596 aaPredicted RBP12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 FAM205BPQ63HN1 556 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 KLHDC10Q6PID8 442 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 CEP76Q8TAP6 659 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 ZNF559Q9BR84 538 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 PELI2Q9HAT8 420 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 GPRC5BQ9NZH0 403 aa12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 VSX1Q9NZR4 365 aaPredicted RBP12.96□□□□□ -0.33
SEMA6D-208ENST00000558014 AQP12BA6NM10 295 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 PPM1BO75688 479 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 FGF3P11487 239 aaPredicted RBP12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 RIDAP52758 137 aaKnown RBP12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ZNF252P-AS1Q0IIN9 211 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 RSU1Q15404 277 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 MSANTD1Q6ZTZ1 278 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 AQP12AQ8IXF9 295 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 MUCL1Q96DR8 90 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 SGCZQ96LD1 299 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ZNF285Q96NJ3 590 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ZNF224Q9NZL3 707 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ADAMTS6Q9UKP5 1117 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 NUP188Q5SRE5 1749 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ENTPD6O75354 484 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ZFAND5O76080 213 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 TMEM225BP0DP42 221 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 SLC5A2P31639 672 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 BDH1Q02338 343 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 SPEM2Q0P670 501 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 KCNAB1Q14722 419 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 UBE2UQ5VVX9 321 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 USP43Q70EL4 1123 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 NRMQ8IXM6 262 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ZFP41Q8N8Y5 198 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ZNF845Q96IR2 970 aaPredicted RBP12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 ARL5BQ96KC2 179 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 PKP2Q99959 881 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 SLC7A8Q9UHI5 535 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 SLC7A7Q9UM01 511 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 MGAT4BQ9UQ53 548 aa12.96□□□□□ -0.34
SEMA6D-208ENST00000558014 RFPL1O75677 317 aa12.95□□□□□ -0.34
SEMA6D-208ENST00000558014 ACADVLP49748 655 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms