RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 OR4A15Q8NGL6 344 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 SPACA9Q96E40 222 aaPredicted RBP23.58■■□□□ 1.36
SMAD6-202ENST00000557916 EQTNQ9NQ60 294 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 KLHL1Q9NR64 748 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 ZCCHC3Q9NUD5 404 aaKnown RBP23.58■■□□□ 1.36
SMAD6-202ENST00000557916 KLHL14Q9P2G3 628 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 PCDHGA10Q9Y5H3 936 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 NPFFR2Q9Y5X5 522 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 FAM234BA2RU67 622 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 CPSF4O95639 269 aaKnown RBP23.57■■□□□ 1.36
SMAD6-202ENST00000557916 SP1P08047 785 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 FBXO45P0C2W1 286 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 LSP1P33241 339 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 ZFP36L2P47974 494 aaKnown RBP23.57■■□□□ 1.36
SMAD6-202ENST00000557916 SQLEQ14534 574 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 ZNHIT3Q15649 155 aaPredicted RBP23.57■■□□□ 1.36
SMAD6-202ENST00000557916 ZNF791Q3KP31 576 aaPredicted RBP23.57■■□□□ 1.36
SMAD6-202ENST00000557916 METTL21CQ5VZV1 264 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 NPSR1Q6W5P4 371 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 MDGA2Q7Z553 956 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 SLC44A2Q8IWA5 706 aaPredicted RBP23.57■■□□□ 1.36
SMAD6-202ENST00000557916 PRR22Q8IZ63 422 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 MS4A4EQ96PG1 132 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 HES7Q9BYE0 225 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 TIMMDC1Q9NPL8 285 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 PCDHGB6Q9Y5F9 930 aa23.57■■□□□ 1.36
SMAD6-202ENST00000557916 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 TTLL8A6PVC2 850 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 CAPN14A8MX76 684 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 SUV39H1O43463 412 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 ABCD3P28288 659 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 SEC24CP53992 1094 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 MAPKAPK3Q16644 382 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 RTL4Q6ZR62 310 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 WDR53Q7Z5U6 358 aaPredicted RBP23.56■■□□□ 1.36
SMAD6-202ENST00000557916 DND1Q8IYX4 353 aaKnown RBP23.56■■□□□ 1.36
SMAD6-202ENST00000557916 TMEM178AQ8NBL3 297 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 OR56A1Q8NGH5 318 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 SFXN5Q8TD22 340 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 MOAP1Q96BY2 351 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 GIMAP5Q96F15 307 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 SCMH1Q96GD3 660 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 SGCZQ96LD1 299 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 CCDC115Q96NT0 180 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 TRIM4Q9C037 500 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 FAM53CQ9NYF3 392 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 BTNL2Q9UIR0 455 aa23.56■■□□□ 1.36
SMAD6-202ENST00000557916 TO15178 435 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 SOAT1P35610 550 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 TMED10P49755 219 aaKnown RBP23.55■■□□□ 1.36
SMAD6-202ENST00000557916 GNGT1P63211 74 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 PSG6Q00889 435 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 LRRC74AQ0VAA2 488 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 RPUSD3Q6P087 351 aaKnown RBP23.55■■□□□ 1.36
SMAD6-202ENST00000557916 FAM13CQ8NE31 585 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 OR5AK3PQ8NH89 298 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 LMF2Q9BU23 707 aaKnown RBP23.55■■□□□ 1.36
SMAD6-202ENST00000557916 RABEP2Q9H5N1 569 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 CCDC167Q9P0B6 97 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 OR10H1Q9Y4A9 318 aa23.55■■□□□ 1.36
SMAD6-202ENST00000557916 TTC36A6NLP5 189 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 NME2P1O60361 137 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 NAGAP17050 411 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 NME2P22392 152 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 PLCXD2Q0VAA5 305 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 TP53BP2Q13625 1128 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 TIGD2Q4W5G0 525 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 GALNTL5Q7Z4T8 443 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 FUNDC1Q8IVP5 155 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 SLC34A3Q8N130 599 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 CDRT4Q8N9R6 151 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 GOLM1Q8NBJ4 401 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 PSD4Q8NDX1 1056 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 OMA1Q96E52 524 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 C16orf58Q96GQ5 468 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 TMEM45AQ9NWC5 275 aa23.54■■□□□ 1.36
SMAD6-202ENST00000557916 HMGN2P05204 90 aaKnown RBP23.53■■□□□ 1.36
SMAD6-202ENST00000557916 KCNK10P57789 538 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 PSPHP78330 225 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 C19orf57Q0VDD7 668 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 NTRK2Q16620 822 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 VPS26BQ4G0F5 336 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 AGKQ53H12 422 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 MFSD12Q6NUT3 480 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 ZCCHC12Q6PEW1 402 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 BHLHB9Q6PI77 547 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 BLOC1S3Q6QNY0 202 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 MSANTD1Q6ZTZ1 278 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 OR4N2Q8NGD1 307 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 OR5M3Q8NGP4 307 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 GOT1L1Q8NHS2 421 aaPredicted RBP23.53■■□□□ 1.36
SMAD6-202ENST00000557916 TMBIM1Q969X1 311 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 VPS33AQ96AX1 596 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 PANX1Q96RD7 426 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 ZNF385DQ9H6B1 395 aa23.53■■□□□ 1.36
SMAD6-202ENST00000557916 GMNCA6NCL1 334 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 PPM1BO75688 479 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 UQCRC2P22695 453 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 PRIM2P49643 509 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 FBXW4P57775 412 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms