RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, human

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH11-211	ENST00000557726	PPIC	P45877	212 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	SLCO1A2	P46721	670 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TRA2B	P62995	288 aa	Known RBP	11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	MRPS35	P82673	323 aa	Known RBP	11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	SORD	Q00796	357 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	GALNT1	Q10472	559 aa	Predicted RBP	11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	LTB4R	Q15722	352 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TRMT12	Q53H54	448 aa	Known RBP	11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TEX35	Q5T0J7	233 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	UBAP2	Q5T6F2	1119 aa	Known RBP	11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	LETMD1	Q6P1Q0	360 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TMEM81	Q6P7N7	255 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	LUZP2	Q86TE4	346 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TRIM42	Q8IWZ5	723 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	SIMC1	Q8NDZ2	872 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TMBIM1	Q969X1	311 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	INTS12	Q96CB8	462 aa	Known RBP	11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TMCO6	Q96DC7	493 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	MBD6	Q96DN6	1003 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	DTNBP1	Q96EV8	351 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	ZFP3	Q96NJ6	502 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	COL21A1	Q96P44	957 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	HBEGF	Q99075	208 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	PAFAH2	Q99487	392 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TM9SF2	Q99805	663 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	TUBA1C	Q9BQE3	449 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	MRPL46	Q9H2W6	279 aa	Known RBP	11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	BRF2	Q9HAW0	419 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	ZNF639	Q9UID6	485 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	UTS2R	Q9UKP6	389 aa		11.63	□□□□□ -0.55
RDH11-211	ENST00000557726	ZFHX3	Q15911	3703 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	FRG2C	A6NGY1	282 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	CLCA1	A8K7I4	914 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	TRIM49D1	C9J1S8	452 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	PPP6C	O00743	305 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	CASK	O14936	926 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	BCAS2	O75934	225 aa	Predicted RBP	11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	OR4F21	O95013	312 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	ATE1	O95260	518 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	CPN1	P15169	458 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	DRD5	P21918	477 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	TCEA1	P23193	301 aa	Known RBP	11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	SOX18	P35713	384 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	MAGEA12	P43365	314 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	STAR	P49675	285 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	ADAM8	P78325	824 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	DUSP2	Q05923	314 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	FOXF2	Q12947	444 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	POU4F3	Q15319	338 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	ERCC6L	Q2NKX8	1250 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	DEFB113	Q30KQ7	82 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	SCIMP	Q6UWF3	145 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	IFNE	Q86WN2	208 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	PLCZ1	Q86YW0	608 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	CCDC116	Q8IYX3	515 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	GCNT2	Q8N0V5	402 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	WDSUB1	Q8N9V3	476 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	UHMK1	Q8TAS1	419 aa	Known RBP	11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	ZNF483	Q8TF39	744 aa	Predicted RBP	11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	WNT2B	Q93097	391 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	ISL2	Q96A47	359 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	CTHRC1	Q96CG8	243 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	NTNG2	Q96CW9	530 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	CNRIP1	Q96F85	164 aa	Predicted RBP	11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	SFXN3	Q9BWM7	321 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	OR2B2	Q9GZK3	357 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	TSPYL1	Q9H0U9	437 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	ACBD3	Q9H3P7	528 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	TAS2R10	Q9NYW0	307 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	JKAMP	Q9P055	326 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	VPS29	Q9UBQ0	182 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	TRPS1	Q9UHF7	1281 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	DKKL1	Q9UK85	242 aa		11.62	□□□□□ -0.55
RDH11-211	ENST00000557726	OR6C70	A6NIJ9	312 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726		A8MT66	165 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	T	O15178	435 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	ABCB7	O75027	752 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	SUPT7L	O94864	414 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	RCBTB2	O95199	551 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	GOSR1	O95249	250 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	KRT6A	P02538	564 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	KRT6B	P04259	564 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	FOSL1	P15407	271 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	TAC1	P20366	129 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	IL12B	P29460	328 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	KRT6C	P48668	564 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	EMD	P50402	254 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	DIO3	P55073	304 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	HMGCS1	Q01581	520 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	CLC	Q05315	142 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	EFR3A	Q14156	821 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	FAM219B	Q5XKK7	198 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	OR5M10	Q6IEU7	315 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	AAGAB	Q6PD74	315 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	PLXDC2	Q6UX71	529 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	CHMP1B	Q7LBR1	199 aa		11.61	□□□□□ -0.55
RDH11-211	ENST00000557726	GRAMD2A	Q8IUY3	354 aa		11.61	□□□□□ -0.55

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