RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PPM1BO75688 479 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 TBX6O95947 436 aaPredicted RBP8.3□□□□□ -1.08
NEDD1-211ENST00000557454 PRB2P02812 416 aaPredicted RBP8.3□□□□□ -1.08
NEDD1-211ENST00000557454 TACSTD2P09758 323 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 BMP4P12644 408 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 ALOX15P16050 662 aaPredicted RBP8.3□□□□□ -1.08
NEDD1-211ENST00000557454 MGAT1P26572 445 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 NMBRP28336 390 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 GCH1P30793 250 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 GDF10P55107 478 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 CRADDP78560 199 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 MYL5Q02045 173 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 CHRNB3Q05901 458 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 SRSF4Q08170 494 aaKnown RBP8.3□□□□□ -1.08
NEDD1-211ENST00000557454 DHX9Q08211 1270 aaKnown RBP8.3□□□□□ -1.08
NEDD1-211ENST00000557454 SNTA1Q13424 505 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 PPA1Q15181 289 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 SPRED3Q2MJR0 410 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 DEPDC1Q5TB30 811 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 RAET1LQ5VY80 246 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 DUPD1Q68J44 220 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 OR5M10Q6IEU7 315 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 NXPE4Q6UWF7 544 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 METTL25Q8N6Q8 603 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 ANKS4BQ8N8V4 417 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 CD200R1Q8TD46 325 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 KISS1RQ969F8 398 aaPredicted RBP8.3□□□□□ -1.08
NEDD1-211ENST00000557454 GFM2Q969S9 779 aaKnown RBP8.3□□□□□ -1.08
NEDD1-211ENST00000557454 ZBTB8AQ96BR9 441 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 CCT8L2Q96SF2 557 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 GPR21Q99679 349 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 PRRG4Q9BZD6 226 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 GOLPH3Q9H4A6 298 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 PARVBQ9HBI1 364 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 LYRM4Q9HD34 91 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 DDX28Q9NUL7 540 aaKnown RBP8.3□□□□□ -1.08
NEDD1-211ENST00000557454 HIF1ANQ9NWT6 349 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 EHD3Q9NZN3 535 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 LOC105371242A0A075B767 164 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 C17orf51A8MQB3 221 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 H3BML4 177 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 PDE5AO76074 875 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 VAPBO95292 243 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 RPS3AP61247 264 aaKnown RBP8.29□□□□□ -1.08
NEDD1-211ENST00000557454 IL13RA1P78552 427 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 SGCBQ16585 318 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 ADPRMQ3LIE5 342 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 UGT3A1Q6NUS8 523 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 ZNF544Q6NX49 715 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 CES3Q6UWW8 571 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 Q6ZSR9 355 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 BHLHA15Q7RTS1 189 aaPredicted RBP8.29□□□□□ -1.08
NEDD1-211ENST00000557454 ST13P4Q8IZP2 240 aaPredicted RBP8.29□□□□□ -1.08
NEDD1-211ENST00000557454 BBOF1Q8ND07 529 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 OR5M1Q8NGP8 315 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 TAF15Q92804 592 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEDD1-211ENST00000557454 RIT1Q92963 219 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 ADIPOR1Q96A54 375 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 MTBPQ96DY7 904 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 RADILQ96JH8 1075 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 LPAR2Q9HBW0 351 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 MYOZ1Q9NP98 299 aaPredicted RBP8.29□□□□□ -1.08
NEDD1-211ENST00000557454 KLHL42Q9P2K6 505 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 DMGDHQ9UI17 866 aaKnown RBP8.29□□□□□ -1.08
NEDD1-211ENST00000557454 DHRS7Q9Y394 339 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 ZNF337Q9Y3M9 751 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 DYRK1BQ9Y463 629 aa8.29□□□□□ -1.08
NEDD1-211ENST00000557454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEDD1-211ENST00000557454 GOLGA8QA0A0J9YX86 632 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 GOLGA8OA6NCC3 632 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 GOLGA8NF8WBI6 632 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 GOLGA8MH3BSY2 632 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 GOLGA8RI6L899 631 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 PFDN6O15212 129 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 UGT2B11O75310 529 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 PRKRAO75569 313 aaKnown RBP8.28□□□□□ -1.08
NEDD1-211ENST00000557454 CLDN9O95484 217 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 AIFM1O95831 613 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 ADAP00813 363 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 C8GP07360 202 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 CPN2P22792 545 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 AGTR1P30556 359 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 SESN2P58004 480 aaPredicted RBP8.28□□□□□ -1.08
NEDD1-211ENST00000557454 UBE2HP62256 183 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 PHC1P78364 1004 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 HMGCS1Q01581 520 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 MAP4K2Q12851 820 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 SP140Q13342 867 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 TRIP10Q15642 601 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEDD1-211ENST00000557454 PCID2Q5JVF3 399 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 ADNP2Q6IQ32 1131 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 MFSD12Q6NUT3 480 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 ZNF549Q6P9A3 640 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 TFAP2EQ6VUC0 442 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
NEDD1-211ENST00000557454 CENPUQ71F23 418 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 NUP54Q7Z3B4 507 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 VN1R5Q7Z5H4 357 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 BPIFB2Q8N4F0 458 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms