RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 OR2B2Q9GZK3 357 aa12.78□□□□□ -0.36
SLIRP-210ENST00000557431 VPS11Q9H270 941 aa12.78□□□□□ -0.36
SLIRP-210ENST00000557431 UBTD1Q9HAC8 227 aa12.78□□□□□ -0.36
SLIRP-210ENST00000557431 BEX4Q9NWD9 120 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-210ENST00000557431 KLHL28Q9NXS3 571 aa12.78□□□□□ -0.36
SLIRP-210ENST00000557431 RNF14Q9UBS8 474 aa12.78□□□□□ -0.36
SLIRP-210ENST00000557431 CES1P1Q9UKY3 287 aa12.78□□□□□ -0.36
SLIRP-210ENST00000557431 A0A087X1B8 175 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 A0A096LPK6 155 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 TRIM64BA6NI03 449 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 FOXE1O00358 373 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-210ENST00000557431 PPP6CO00743 305 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 TNFSF13O75888 250 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 RCBTB2O95199 551 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 HEXAP06865 529 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 CPN1P15169 458 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 ALDH9A1P49189 494 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 LHX2P50458 406 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 MAPK12P53778 367 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 SIRPAP78324 504 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 ILF2Q12905 390 aaKnown RBP12.77□□□□□ -0.37
SLIRP-210ENST00000557431 FRG2Q64ET8 278 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 SLC30A6Q6NXT4 461 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 SLC48A1Q6P1K1 146 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF550Q7Z398 422 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 IFNEQ86WN2 208 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 GRAMD2AQ8IUY3 354 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 UBQLNLQ8IYU4 475 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 OR7G1Q8NGA0 311 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 CTHRC1Q96CG8 243 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 KLHL29Q96CT2 875 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 PIK3IP1Q96FE7 263 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 PERPQ96FX8 193 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 ZC3HAV1LQ96H79 300 aaKnown RBP12.77□□□□□ -0.37
SLIRP-210ENST00000557431 WFIKKN1Q96NZ8 548 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 FRG2BQ96QU4 278 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 SFXN3Q9BWM7 321 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 OPN3Q9H1Y3 402 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-210ENST00000557431 HEY2Q9UBP5 337 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 FETUBQ9UGM5 382 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 SLC12A4Q9UP95 1085 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 EXO1Q9UQ84 846 aaKnown RBP12.77□□□□□ -0.37
SLIRP-210ENST00000557431 TESMINQ9Y4I5 508 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 PCDHA9Q9Y5H5 950 aa12.77□□□□□ -0.37
SLIRP-210ENST00000557431 A0A1W2PNV4 684 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 FAM187AA6NFU0 413 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 A8MXE2 369 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 DEFB108AA8MXU0 73 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 H0YC42 278 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 CASKO14936 926 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 UGDHO60701 494 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 REM1O75628 298 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 SEMA3DO95025 777 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 KLHL2O95198 593 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 ALDOAP04075 364 aaKnown RBP12.76□□□□□ -0.37
SLIRP-210ENST00000557431 GSTA2P09210 222 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 CCKARP32238 428 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 STX2P32856 288 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 DEKP35659 375 aaKnown RBP12.76□□□□□ -0.37
SLIRP-210ENST00000557431 TPD52P55327 224 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-210ENST00000557431 GFRA1P56159 465 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 CLDN18P56856 261 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 GALNT1Q10472 559 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-210ENST00000557431 ACAP2Q15057 778 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 FAM83EQ2M2I3 478 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 TCHHL1Q5QJ38 904 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-210ENST00000557431 SHEQ5VZ18 495 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 ENPP6Q6UWR7 440 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 CYS1Q717R9 158 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 COMMD6Q7Z4G1 85 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 METTL4Q8N3J2 472 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 CNEP1R1Q8N9A8 125 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 C17orf47Q8NEP4 570 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 OR4F6Q8NGB9 312 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 NUDT8Q8WV74 236 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 KAT2AQ92830 837 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 TM4SF18Q96CE8 201 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 CNRIP1Q96F85 164 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-210ENST00000557431 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 SFXN2Q96NB2 322 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 FAM111AQ96PZ2 611 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 HS3ST6Q96QI5 342 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 TM9SF2Q99805 663 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 TAS2R10Q9NYW0 307 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF639Q9UID6 485 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 DKKL1Q9UK85 242 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 PCTPQ9UKL6 214 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 PACSIN3Q9UKS6 424 aa12.76□□□□□ -0.37
SLIRP-210ENST00000557431 EIF3LQ9Y262 564 aaKnown RBP12.76□□□□□ -0.37
SLIRP-210ENST00000557431 ESYT3A0FGR9 886 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 C1orf226A1L170 272 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 SMPD2O60906 423 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 PDYNP01213 254 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 TYK2P29597 1187 aa12.75□□□□□ -0.37
SLIRP-210ENST00000557431 GCKP35557 465 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms