RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ESAMQ96AP7 390 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 SIPA1Q96FS4 1042 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 RMDN2Q96LZ7 410 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 ANKRD27Q96NW4 1050 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 GSDMAQ96QA5 445 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 MTMR9Q96QG7 549 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 HSD17B14Q9BPX1 270 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 FERMT1Q9BQL6 677 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 TNMDQ9H2S6 317 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 C5orf66Q9H5L9 145 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 ZCCHC17Q9NP64 241 aaKnown RBP2.89□□□□□ -1.95
VRK1-207ENST00000557352 KCNMB3Q9NPA1 279 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 MRGBPQ9NV56 204 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 HOXC10Q9NYD6 342 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 C5AR2Q9P296 337 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 RUVBL2Q9Y230 463 aaKnown RBP2.89□□□□□ -1.95
VRK1-207ENST00000557352 NCKAP1Q9Y2A7 1128 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 KLK4Q9Y5K2 254 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 IGLV3-22A0A075B6J6 115 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 SYCE3A1L190 88 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 E7ENQ6 273 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 FASP25445 335 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 MARCKSP29966 332 aaPredicted RBP2.88□□□□□ -1.95
VRK1-207ENST00000557352 PPP1R2P41236 205 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 ZNF41P51814 821 aaPredicted RBP2.88□□□□□ -1.95
VRK1-207ENST00000557352 NDUFA8P51970 172 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 PEX3P56589 373 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 RPS27AP62979 156 aaKnown RBP2.88□□□□□ -1.95
VRK1-207ENST00000557352 TSPY1Q01534 308 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 CNTN1Q12860 1018 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 PPP2R5CQ13362 524 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 VGLL4Q14135 290 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 FASTKQ14296 549 aaKnown RBP2.88□□□□□ -1.95
VRK1-207ENST00000557352 MAPK11Q15759 364 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 STX1AQ16623 288 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 HYAL4Q2M3T9 481 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 LBHQ53QV2 105 aaPredicted RBP2.88□□□□□ -1.95
VRK1-207ENST00000557352 LRRC73Q5JTD7 316 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 ZNF600Q6ZNG1 722 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 NUFIP2Q7Z417 695 aaKnown RBP2.88□□□□□ -1.95
VRK1-207ENST00000557352 SETD6Q8TBK2 473 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 TBCKQ8TEA7 893 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 GTSF1Q8WW33 167 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 PPP1R16AQ96I34 528 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 SPATA17Q96L03 361 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 RIT2Q99578 217 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 NAT10Q9H0A0 1025 aaKnown RBP2.88□□□□□ -1.95
VRK1-207ENST00000557352 NT5C3AQ9H0P0 336 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 LIME1Q9H400 295 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 TSPY26PQ9H489 355 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 DPEP2Q9H4A9 486 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 GRPEL1Q9HAV7 217 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 ANO10Q9NW15 660 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 PFASO15067 1338 aa2.88□□□□□ -1.95
VRK1-207ENST00000557352 A0A1B0GVL5 298 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 PVALEFA0A1B0GWK0 134 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 ARHGEF37A1IGU5 675 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 E2F3O00716 465 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 POLR2DO15514 142 aaKnown RBP2.87□□□□□ -1.95
VRK1-207ENST00000557352 FLOT1O75955 427 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 SMC2O95347 1197 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 LYPLA2O95372 231 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 SLC25A27O95847 323 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 POLR2MP0CAP2 368 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 PTAFRP25105 342 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 RPA1P27694 616 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 RGRP47804 291 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 HMGCS2P54868 508 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 ADARP55265 1226 aaKnown RBP2.87□□□□□ -1.95
VRK1-207ENST00000557352 RBBP4Q09028 425 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 CCDC173Q0VFZ6 552 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 SPP2Q13103 211 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 PPA1Q15181 289 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 IL17AQ16552 155 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 CEP55Q53EZ4 464 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 CGB2Q6NT52 195 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 SASS6Q6UVJ0 657 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 PPP1R21Q6ZMI0 780 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 SPATA21Q7Z572 469 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 CARNMT1Q8N4J0 409 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 MLKLQ8NB16 471 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 ZNRF1Q8ND25 227 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 CNNM3Q8NE01 707 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 ERMNQ8TAM6 284 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 PCNPQ8WW12 178 aaKnown RBP2.87□□□□□ -1.95
VRK1-207ENST00000557352 LIPHQ8WWY8 451 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 CDHR1Q96JP9 859 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 FER1L6-AS2Q96M78 137 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 DEFB126Q9BYW3 111 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 RPAP3Q9H6T3 665 aaPredicted RBP2.87□□□□□ -1.95
VRK1-207ENST00000557352 ASB8Q9H765 288 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 TUFT1Q9NNX1 390 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 RMND1Q9NWS8 449 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 RSPH14Q9UHP6 348 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 CCPG1Q9ULG6 757 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 SNX7Q9UNH6 387 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 NTNG1Q9Y2I2 539 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 NFASCO94856 1347 aa2.87□□□□□ -1.95
VRK1-207ENST00000557352 ANXA2P2A6NMY6 339 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms