RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 DIO2Q92813 273 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 CIDECQ96AQ7 238 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-209ENST00000557342 OMA1Q96E52 524 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 VSTM2LQ96N03 204 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 TTTY12Q9BZ98 90 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 ANKRA2Q9H9E1 313 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 CNOT11Q9UKZ1 510 aaKnown RBP11.49□□□□□ -0.57
SLIRP-209ENST00000557342 BOKQ9UMX3 212 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-209ENST00000557342 OSGIN2Q9Y236 505 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 SLC5A6Q9Y289 635 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.49□□□□□ -0.57
SLIRP-209ENST00000557342 NBASA2RRP1 2371 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 PINLYPA6NC86 204 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 UPK1AO00322 258 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 HS6ST1O60243 411 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 ABCB7O75027 752 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 SASH3O75995 380 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 GLSO94925 669 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 SNX4O95219 450 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 ABCB1P08183 1280 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 STSP08842 583 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 CT45A8P0DMV1 189 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 CT45A9P0DMV2 189 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 G6PDP11413 515 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 KRT20P35900 424 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 PIGAP37287 484 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 RFC3P40938 356 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 DNASE1L1P49184 302 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 CASP6P55212 293 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 CLDN8P56748 225 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 FBXW4P57775 412 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 C21orf58P58505 322 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 MRPS22P82650 360 aaKnown RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 OCRLQ01968 901 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 ZNF155Q12901 538 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 HYAL4Q2M3T9 481 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 LSM12Q3MHD2 195 aaKnown RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 CT45A2Q5DJT8 189 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 TMEM81Q6P7N7 255 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 TMEM64Q6YI46 380 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 ZNF551Q7Z340 670 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 OR7A2PQ8NGA2 310 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 DYDC1Q8WWB3 177 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 ZNF75CPQ92670 426 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 COQ8BQ96D53 544 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 MAGED4Q96JG8 741 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 DOHHQ9BU89 302 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 BHLHE41Q9C0J9 482 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 TSPAN10Q9H1Z9 355 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 C3orf14Q9HBI5 128 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 TUBA8Q9NY65 449 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
SLIRP-209ENST00000557342 HELZ2Q9BYK8 2649 aaKnown RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 GCN1Q92616 2671 aaKnown RBP11.48□□□□□ -0.57
SLIRP-209ENST00000557342 A0A0G2JMM0 328 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 A0A1W2PPB8 328 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 A0A1W2PRB8 838 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 A0A1W2PRS3 328 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 OR6C70A6NIJ9 312 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 KIR3DP1A8MWS1 328 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 G3V3Y1 287 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 EMC8O43402 210 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 REM1O75628 298 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 PSMG1O95456 288 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 KITP10721 976 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 IL12BP29460 328 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 PER3P56645 1201 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 PPP2R2AP63151 447 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 PRR5P85299 388 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 SRSF1Q07955 248 aaKnown RBP eCLIP11.47□□□□□ -0.57
SLIRP-209ENST00000557342 FOXO1Q12778 655 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 EFR3AQ14156 821 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 CYP27C1Q4G0S4 372 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 TMEM198Q66K66 360 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 OGFOD2Q6N063 350 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 LARP4Q71RC2 724 aaKnown RBP eCLIP11.47□□□□□ -0.572e-8■■□□□ 12.5
SLIRP-209ENST00000557342 SPATA19Q7Z5L4 167 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 CAMKMTQ7Z624 323 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 PACS2Q86VP3 889 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 WDR75Q8IWA0 830 aaKnown RBP11.47□□□□□ -0.57
SLIRP-209ENST00000557342 SLC44A2Q8IWA5 706 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-209ENST00000557342 RIMKLAQ8IXN7 391 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 FAM109AQ8N4B1 249 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 PIWIL2Q8TC59 973 aaKnown RBP11.47□□□□□ -0.57
SLIRP-209ENST00000557342 LRRC8CQ8TDW0 803 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 OR5P2Q8WZ92 322 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 TMBIM1Q969X1 311 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 TMCO6Q96DC7 493 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 ZNF597Q96LX8 424 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 COL21A1Q96P44 957 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 LMF2Q9BU23 707 aaKnown RBP11.47□□□□□ -0.57
SLIRP-209ENST00000557342 ANGPTL4Q9BY76 406 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 DPY30Q9C005 99 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 METTL7AQ9H8H3 244 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 Q9N2J8 555 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 ZFP64Q9NPA5 681 aa11.47□□□□□ -0.57
SLIRP-209ENST00000557342 NTMQ9P121 344 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms